RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 BCL7BQ9BQE9 202 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 FAM103A1Q9BTL3 118 aaKnown RBP2.62□□□□□ -1.99
LIMA1-206ENST00000550611 MRPL20Q9BYC9 149 aaKnown RBP2.62□□□□□ -1.99
LIMA1-206ENST00000550611 FBXL15Q9H469 300 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 PLEKHA3Q9HB20 300 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 Q9N2K0 584 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 NDE1Q9NXR1 346 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 GNG8Q9UK08 70 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 ST3GAL6Q9Y274 331 aa2.62□□□□□ -1.99
LIMA1-206ENST00000550611 VPS13BQ7Z7G8 4022 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 IGLV5-45A0A087WSX0 123 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 A0A0G2JLM5 398 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 TCRBV3S1A0A5B6 114 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 MSGN1A6NI15 193 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 OR11H12B2RN74 326 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 E9PI62 339 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 H0YJW9 148 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 AIPO00170 330 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 GNGT2O14610 69 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 BET1O15155 118 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 AIREO43918 545 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 OR7C1O76099 320 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-206ENST00000550611 OR2A4O95047 310 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 CDRT1O95170 752 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 ATP6V1G2O95670 118 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 FAM107AO95990 144 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 TRBV12-3P01733 135 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 TRGV3P03979 118 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 GLAP06280 429 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 CRYGBP07316 175 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 HTR1AP08908 422 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 CT45A6P0DMU7 189 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 CT45A5P0DMU8 189 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 CT45A7P0DMV0 189 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 RAB4AP20338 218 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 CALB2P22676 271 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 BMI1P35226 326 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 POLR2IP36954 125 aaKnown RBP2.61□□□□□ -1.99
LIMA1-206ENST00000550611 KIR2DS2P43631 304 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 OR3A3P47888 321 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 TPPP2P59282 170 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 RAB4BP61018 213 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 HTD2P86397 168 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF415Q09FC8 603 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 ARL16Q0P5N6 197 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 GNMTQ14749 295 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 PSG5Q15238 335 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 TATDN3Q17R31 274 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF674Q2M3X9 581 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 MPV17LQ2QL34 196 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 C14orf177Q52M58 125 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 SLC25A30Q5SVS4 291 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 SYT6Q5T7P8 510 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-206ENST00000550611 PRR27Q6MZM9 219 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 FAM71F2Q6NXP2 309 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 UNQ5815/PRO19632Q6UWF5 114 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 GPR141Q7Z602 305 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF680Q8NEM1 530 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 SLC24A4Q8NFF2 622 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 DMBX1Q8NFW5 382 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 OR10H4Q8NGA5 316 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 OR8J1Q8NGP2 316 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 OR4K15Q8NH41 348 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 TNFAIP8L1Q8WVP5 186 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 RGP1Q92546 391 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-206ENST00000550611 GHSRQ92847 366 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 TXN2Q99757 166 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 URM1Q9BTM9 101 aaKnown RBP2.61□□□□□ -1.99
LIMA1-206ENST00000550611 PRRG3Q9BZD7 231 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 PARP12Q9H0J9 701 aaKnown RBP2.61□□□□□ -1.99
LIMA1-206ENST00000550611 METTL9Q9H1A3 318 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 WFDC10AQ9H1F0 79 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 IFI27L2Q9H2X8 130 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 RIBC2Q9H4K1 309 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 SRD5A3Q9H8P0 318 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 TAF9BQ9HBM6 251 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 OR2S2Q9NQN1 319 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 GNG12Q9UBI6 72 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 PEF1Q9UBV8 284 aaKnown RBP2.61□□□□□ -1.99
LIMA1-206ENST00000550611 DAPK2Q9UIK4 370 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 JPT1Q9UK76 154 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 TP53TG1Q9Y2A0 90 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 EXOGQ9Y2C4 368 aaKnown RBP2.61□□□□□ -1.99
LIMA1-206ENST00000550611 KCNK7Q9Y2U2 307 aa2.61□□□□□ -1.99
LIMA1-206ENST00000550611 KLK5Q9Y337 293 aaPredicted RBP2.61□□□□□ -1.99
LIMA1-206ENST00000550611 FLG2Q5D862 2391 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 A0A0J9YWU9 116 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 C13orf42A0A1B0GVH6 325 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 A0A1W2PPQ1 181 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 MCRIP1C9JLW8 97 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 J3QLW9 94 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 ITGB1BP1O14713 200 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF780AO75290 641 aaPredicted RBP2.6□□□□□ -1.99
LIMA1-206ENST00000550611 FKBP6O75344 327 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 CA11O75493 328 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 GPX5O75715 221 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 RBBP9O75884 186 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 CA2P00918 260 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 IGLV2-23P01705 113 aa2.6□□□□□ -1.99
LIMA1-206ENST00000550611 OCM2P0CE71 109 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms