RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 HABP2Q14520 560 aaPredicted RBP3.59□□□□□ -1.84
CCDC59-204ENST00000550589 ELOBQ15370 118 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 POU2AF1Q16633 256 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 BSXQ3C1V8 233 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 STUMQ69YW2 141 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 ZNF788Q6ZQV5 615 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 LRP11Q86VZ4 500 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 SLC24A4Q8NFF2 622 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 OR4F5Q8NH21 305 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 OR4A5Q8NH83 315 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 CA5BP1Q8WTZ4 195 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 RAB24Q969Q5 203 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 TMEM186Q96B77 213 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 FAM210BQ96KR6 192 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 ZNF714Q96N38 554 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 UHRF2Q96PU4 802 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 OR4F4Q96R69 305 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 QTRT1Q9BXR0 403 aaKnown RBP3.59□□□□□ -1.84
CCDC59-204ENST00000550589 IFI27L2Q9H2X8 130 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 CHODLQ9H9P2 273 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 PLEKHA3Q9HB20 300 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 SLC25A10Q9UBX3 287 aaPredicted RBP3.59□□□□□ -1.84
CCDC59-204ENST00000550589 FOXA2Q9Y261 457 aaPredicted RBP3.59□□□□□ -1.84
CCDC59-204ENST00000550589 WDR83OSQ9Y284 106 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 PPIAL4AQ9Y536 164 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 CACNA1HO95180 2353 aa3.59□□□□□ -1.84
CCDC59-204ENST00000550589 IGHV3OR15-7A0A075B7D8 119 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 SEC14L6B5MCN3 397 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 C11orf94C9JXX5 98 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 H7BYZ3 331 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 J3QR06 171 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 CGB3P0DN86 165 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 CGB7P0DN87 165 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 CD99P14209 185 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 EGR1P18146 543 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 MC5RP33032 325 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 RPL29P47914 159 aaKnown RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 RND2P52198 227 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 FGF8P55075 233 aaPredicted RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 FAM3BP58499 235 aaPredicted RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 RPL31P62899 125 aaKnown RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 ADIRFQ15847 76 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 FAM90A2PQ658T7 463 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 SLC25A48Q6ZT89 311 aaKnown RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 HAPLN4Q86UW8 402 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 DOLPP1Q86YN1 238 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 C8orf31Q8N9H6 132 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 SYT8Q8NBV8 401 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 DEFB108BQ8NET1 73 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 OR4C13Q8NGP0 309 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 CACNG8Q8WXS5 425 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 FLYWCH2Q96CP2 140 aaKnown RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 RNF2Q99496 336 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 COMMD5Q9GZQ3 224 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 VSIRQ9H7M9 311 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 SLC25A22Q9H936 323 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 DYNLRB1Q9NP97 96 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 SLC35D1Q9NTN3 355 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 RPUSD1Q9UJJ7 312 aaKnown RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 TCF19Q9Y242 345 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 URGCP-MRPS24S4R325 110 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 ARL2-SNX15V9GYD0 113 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 FREM2Q5SZK8 3169 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 FRYLO94915 3013 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 SAA2-SAA4A0A096LPE2 208 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 C15orf62A8K5M9 175 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 B9A039 149 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 OVOL3O00110 214 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 GYPAP02724 150 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 OR9G9P0C7N8 305 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 SAA2P0DJI9 122 aaPredicted RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 MDKP21741 143 aaPredicted RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 USF1P22415 310 aaPredicted RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 APOBEC3AP31941 199 aaPredicted RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 SRP14P37108 136 aaKnown RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 CDX1P47902 265 aaPredicted RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 BRWD1-AS2P59051 145 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 B2MP61769 119 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 CCL8P80075 99 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 LCN2P80188 198 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 TLE1Q04724 770 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 ZNF726P1Q15940 193 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 C17orf58Q2M2W7 97 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 RPL39P5Q59GN2 51 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 CT45A1Q5HYN5 189 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 CST9LP1Q5W188 147 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 WDR25Q64LD2 544 aaPredicted RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 OR4A47Q6IF82 309 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 TGIF2LYQ8IUE0 185 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 LINC01356Q8N9X3 169 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 OR10X1Q8NGY0 326 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 CT45A3Q8NHU0 189 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 DDB2Q92466 427 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 TNFRSF14Q92956 283 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 RPUSD4Q96CM3 377 aaKnown RBP3.58□□□□□ -1.84
CCDC59-204ENST00000550589 SLC35E1Q96K37 410 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 IMMP2LQ96T52 175 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 CCL13Q99616 98 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 VKORC1Q9BQB6 163 aa3.58□□□□□ -1.84
CCDC59-204ENST00000550589 TMEM167BQ9NRX6 74 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms