RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, human

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF41-208	ENST00000550379	BTBD17	A6NE02	478 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379		G3V3Q6	166 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379		H3BUX3	64 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	KCNAB3	O43448	404 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	SYNGR2	O43760	224 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	SLC25A17	O43808	307 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	TSC22D2	O75157	780 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	DEDD	O75618	318 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	MPC2	O95563	127 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	MBP	P02686	304 aa	Predicted RBP	6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	C1QB	P02746	253 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	CRYGC	P07315	174 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	RNASE1	P07998	156 aa	Known RBP	6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	OR9G9	P0C7N8	305 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	TMEM11	P17152	192 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	SRD5A1	P18405	259 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	CHRNA7	P36544	502 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	SRP14	P37108	136 aa	Known RBP	6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	VDAC2	P45880	294 aa	Predicted RBP	6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	OR2B8P	P59922	312 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	PRB3	Q04118	309 aa	Predicted RBP	6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	MMD	Q15546	238 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	AKIRIN2	Q53H80	203 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	C19orf54	Q5BKX5	351 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	AKAP14	Q86UN6	197 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	NOXA1	Q86UR1	476 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	PDZD9	Q8IXQ8	264 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	STPG2	Q8N412	459 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	OR1L6	Q8NGR2	347 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	OR4A16	Q8NH70	328 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	PPP1R1C	Q8WVI7	109 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	ATP6V0B	Q99437	205 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	SLC25A33	Q9BSK2	321 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	RNF126	Q9BV68	326 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	METTL1	Q9UBP6	276 aa	Known RBP	6.1	□□□□□ -1.43
RNF41-208	ENST00000550379		U3KQ87	197 aa		6.1	□□□□□ -1.43
RNF41-208	ENST00000550379	SVEP1	Q4LDE5	3571 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	IGHV7-81	A0A0B4J1V7	117 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	IGHV3-72	A0A0B4J1Y9	119 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	TEX50	A0A1B0GTY4	177 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	C5orf51	A6NDU8	294 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	CGB1	A6NKQ9	187 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	CYSRT1	A8MQ03	144 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379		E5RGE8	158 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	FNDC10	F2Z333	226 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379		H3BUA1	57 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	GOSR2	O14653	212 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	CCNK	O75909	580 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	RLN2	P04090	185 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	CX3CL1	P78423	397 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	ZNF345	Q14585	488 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	OR2B11	Q5JQS5	317 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	CXorf66	Q5JRM2	361 aa	Predicted RBP	6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	C11orf87	Q6NUJ2	197 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	PRSS54	Q6PEW0	395 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	RBMS3	Q6XE24	437 aa	Known RBP	6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	SGMS2	Q8NHU3	365 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	ZNF418	Q8TF45	676 aa	Predicted RBP	6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	WFDC12	Q8WWY7	111 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	HYLS1	Q96M11	299 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	QTRT1	Q9BXR0	403 aa	Known RBP	6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	COMMD5	Q9GZQ3	224 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	PRR13	Q9NZ81	148 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	RCL1	Q9Y2P8	373 aa	Known RBP	6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	NSG2	Q9Y328	171 aa		6.09	□□□□□ -1.43
RNF41-208	ENST00000550379	TRAV3	A0A0B4J244	114 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379		A0A1B0GW64	132 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	IGLC7	A0M8Q6	106 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	NPIPB5	A8MRT5	1133 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379		H0YIZ8	118 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379		K7EPK0	472 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	GPR137B	O60478	399 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	ACTL6B	O94805	426 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	NDUFA7	O95182	113 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	IGHV4-59	P01825	116 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	EGR2	P11161	476 aa	Predicted RBP	6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	PVALB	P20472	110 aa	Predicted RBP	6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	CNTFR	P26992	372 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	P2RY1	P47900	373 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	PAX9	P55771	341 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	RPP30	P78346	268 aa	Known RBP	6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	TMEM267	Q0VDI3	215 aa	Predicted RBP	6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	RAB32	Q13637	225 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	HES1	Q14469	280 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	FBLN7	Q53RD9	439 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	C2orf83	Q53S99	150 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	VKORC1L1	Q8N0U8	176 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	TTC9C	Q8N5M4	171 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	OR2C3	Q8N628	320 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	UXS1	Q8NBZ7	420 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	OR2T35	Q8NGX2	323 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	OR1S1	Q8NH92	325 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	RNASE11	Q8TAA1	199 aa	Known RBP	6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	ZDHHC16	Q969W1	377 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	AQP10	Q96PS8	301 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	SMR3A	Q99954	134 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	RASL11B	Q9BPW5	248 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	PDCD10	Q9BUL8	212 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	GGACT	Q9BVM4	153 aa		6.08	□□□□□ -1.44
RNF41-208	ENST00000550379	GON7	Q9BXV9	100 aa		6.08	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms