RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 ST6GALNAC6Q969X2 333 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 PSMG3Q9BT73 122 aaPredicted RBP17■□□□□ 0.31
PRDM4-205ENST00000550376 PBDC1Q9BVG4 233 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 TMPRSS5Q9H3S3 457 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 SLC25A22Q9H936 323 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 CELSR1Q9NYQ6 3014 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 UPK2O00526 184 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 CD1BP29016 333 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 WDR25Q64LD2 544 aaPredicted RBP17■□□□□ 0.31
PRDM4-205ENST00000550376 OR5AN1Q8NGI8 311 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 ONECUT1Q9UBC0 465 aa17■□□□□ 0.31
PRDM4-205ENST00000550376 FOXA2Q9Y261 457 aaPredicted RBP17■□□□□ 0.31
PRDM4-205ENST00000550376 C22orf46C9J442 243 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 CA2P00918 260 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 C4orf17Q53FE4 359 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 FFAR4Q5NUL3 377 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 MOB3BQ86TA1 216 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 LHX4Q969G2 390 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 FLYWCH2Q96CP2 140 aaKnown RBP16.99■□□□□ 0.31
PRDM4-205ENST00000550376 TEX50A0A1B0GTY4 177 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 APOA2P02652 100 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 SERF2P84101 59 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 ATP6V1FQ16864 119 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 TMEM41BQ5BJD5 291 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 C10orf55Q5SWW7 151 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 ZNF787Q6DD87 383 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 TGIF2LXQ8IUE1 241 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 CLDND2Q8NHS1 167 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 NAV3Q8IVL0 2385 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 EPG5Q9HCE0 2579 aa16.99■□□□□ 0.31
PRDM4-205ENST00000550376 CENPEQ02224 2701 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 IGHV2-26A0A0B4J1V2 119 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 MLANAQ16655 118 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 SLC35B3Q9H1N7 401 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 TPSG1Q9NRR2 321 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 CSMD2Q7Z408 3487 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 CELSR2Q9HCU4 2923 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 KBTBD11O94819 623 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 SNAPINO95295 136 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 ATF4P18848 351 aaPredicted RBP16.98■□□□□ 0.31
PRDM4-205ENST00000550376 ARF6P62330 175 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 ICAM4Q14773 271 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 CLRN3Q8NCR9 226 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 LFNGQ8NES3 379 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 SIRT7Q9NRC8 400 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 KIAA1456Q9P272 454 aa16.98■□□□□ 0.31
PRDM4-205ENST00000550376 IL6RP08887 468 aaPredicted RBP16.97■□□□□ 0.31
PRDM4-205ENST00000550376 Q8N7P7 452 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 OR8B3Q8NGG8 313 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 OR8B2Q96RD0 313 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 ENY2Q9NPA8 101 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 POU2AF1Q16633 256 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 TREML4Q6UXN2 200 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 SLC24A4Q8NFF2 622 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 OR10G4Q8NGN3 311 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 OR10G9Q8NGN4 311 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 OR10G7Q8NGN6 311 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 TMEM186Q96B77 213 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 RAB39BQ96DA2 213 aa16.97■□□□□ 0.31
PRDM4-205ENST00000550376 TRBV23-1A0A0A0MS06 115 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 A0A1W2PRD5 423 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 A0A1W2PRF3 423 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 A0A1W2PRM7 423 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 PRSS46E5RG02 174 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 SNRNP70P08621 437 aaKnown RBP16.96■□□□□ 0.31
PRDM4-205ENST00000550376 CNTFRP26992 372 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 VWC2Q2TAL6 325 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 PDLIM3Q53GG5 364 aaPredicted RBP16.96■□□□□ 0.31
PRDM4-205ENST00000550376 FAM122CQ6P4D5 195 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 ZNF709Q8N972 641 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 SLC39A9Q9NUM3 307 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 PUS1Q9Y606 427 aaKnown RBP eCLIP16.96■□□□□ 0.31
PRDM4-205ENST00000550376 MAP1LC3B2A6NCE7 125 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 M0R036 132 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 SCAF4O95104 1147 aaKnown RBP16.96■□□□□ 0.31
PRDM4-205ENST00000550376 NPY1RP25929 384 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 CYB561D1Q8N8Q1 229 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 C1orf159Q96HA4 380 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 MAP1LC3BQ9GZQ8 125 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 ZNF462Q96JM2 2506 aa16.96■□□□□ 0.31
PRDM4-205ENST00000550376 SLC25A17O43808 307 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 APELAP0DMC3 54 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 ARSJQ5FYB0 599 aaPredicted RBP16.95■□□□□ 0.3
PRDM4-205ENST00000550376 GATAD1Q8WUU5 269 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 SSMEM1Q8WWF3 244 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 NEIL1Q96FI4 390 aaPredicted RBP16.95■□□□□ 0.3
PRDM4-205ENST00000550376 PARD6GQ9BYG4 376 aaPredicted RBP16.95■□□□□ 0.3
PRDM4-205ENST00000550376 PLEKHA3Q9HB20 300 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 PATZ1Q9HBE1 687 aaKnown RBP16.95■□□□□ 0.3
PRDM4-205ENST00000550376 PRNDQ9UKY0 176 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 ABCA1O95477 2261 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 A0A087X0M5 115 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 A0A1B0GX30 115 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 CTRB1P17538 263 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 MDKP21741 143 aaPredicted RBP16.95■□□□□ 0.3
PRDM4-205ENST00000550376 RPP30P78346 268 aaKnown RBP16.95■□□□□ 0.3
PRDM4-205ENST00000550376 CTRB2Q6GPI1 263 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 DHRS7BQ6IAN0 325 aaPredicted RBP16.95■□□□□ 0.3
PRDM4-205ENST00000550376 DPPA3Q6W0C5 159 aa16.95■□□□□ 0.3
PRDM4-205ENST00000550376 PNKDQ8N490 385 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms