RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 OR51E2Q9H255 320 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 C11orf68Q9H3H3 251 aaKnown RBP7.68□□□□□ -1.18
VPS29-208ENST00000550267 SLC2A9Q9NRM0 540 aa7.68□□□□□ -1.18
VPS29-208ENST00000550267 PKD1P98161 4303 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 TRBV7-1A0A0A6YYK4 115 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 EFCAB10A6NFE3 127 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 MPTX1A8MV57 137 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 FCGR3AP08637 254 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 ZNF735P0CB33 412 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 CD37P11049 281 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 MYOD1P15172 320 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 RPA2P15927 270 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 HIST1H1BP16401 226 aaKnown RBP7.67□□□□□ -1.18
VPS29-208ENST00000550267 PSMB6P28072 239 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 RASSF2P50749 326 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 MFAP2P55001 183 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 ST3GAL4Q11206 333 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 KLK9Q2XQG4 91 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 ZNF555Q8NEP9 628 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 PHYHIPQ92561 330 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 CSTL1Q9H114 145 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 KLK9Q9UKQ9 250 aa7.67□□□□□ -1.18
VPS29-208ENST00000550267 IGLV11-55A0A075B6I3 123 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 OR4C46A6NHA9 309 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 J3QRK9 145 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 RTL8CO15255 209 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 KBTBD11O94819 623 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 DHFRP00374 187 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 WNT4P56705 351 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 RPL30P62888 115 aaKnown RBP7.66□□□□□ -1.18
VPS29-208ENST00000550267 HSD17B12Q53GQ0 312 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 LAMTOR1Q6IAA8 161 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 PLET1Q6UQ28 207 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 ZNF502Q8TBZ5 544 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 TMEM190Q8WZ59 177 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 CXorf58Q96LI9 332 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 OR2A7Q96R45 310 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 GFI1Q99684 422 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 GINS4Q9BRT9 223 aa7.66□□□□□ -1.18
VPS29-208ENST00000550267 ZNF436Q9C0F3 470 aaPredicted RBP7.66□□□□□ -1.18
VPS29-208ENST00000550267 CGB1A6NKQ9 187 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 RAB27BO00194 218 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 MYL12BO14950 172 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 CDK1P06493 297 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 CTSDP07339 412 aaPredicted RBP7.65□□□□□ -1.18
VPS29-208ENST00000550267 DEFA4P12838 97 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 CRHBPP24387 322 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 PSMD7P51665 324 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 MRPS15P82914 257 aaKnown RBP7.65□□□□□ -1.18
VPS29-208ENST00000550267 ARFRP1Q13795 201 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 ZFP1Q6P2D0 407 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 KCTD9Q7L273 389 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 H1FOOQ8IZA3 346 aaPredicted RBP7.65□□□□□ -1.18
VPS29-208ENST00000550267 PUSL1Q8N0Z8 303 aaKnown RBP7.65□□□□□ -1.18
VPS29-208ENST00000550267 OR56B1Q8NGI3 324 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 OR4A5Q8NH83 315 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 TMEM167AQ8TBQ9 72 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 C6orf62Q9GZU0 229 aaPredicted RBP7.65□□□□□ -1.18
VPS29-208ENST00000550267 PLGRKTQ9HBL7 147 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 KCNK7Q9Y2U2 307 aa7.65□□□□□ -1.18
VPS29-208ENST00000550267 IGHV3OR16-8A0A075B7F1 116 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 C11orf94C9JXX5 98 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 SLC17A2O00624 439 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 TGOLN2O43493 480 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 ZNF207O43670 478 aaKnown RBP7.64□□□□□ -1.19
VPS29-208ENST00000550267 DIRAS3O95661 229 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 MAS1LP35410 378 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 CLDN12P56749 244 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 PLA2G7Q13093 441 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 SSX9Q7RTT3 188 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 ZNF575Q86XF7 245 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 MS4A15Q8N5U1 240 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 ZNF645Q8N7E2 425 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 NANOGP1Q8N7R0 232 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 VSTM2AQ8TAG5 236 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 DAZ1Q9NQZ3 744 aaKnown RBP7.64□□□□□ -1.19
VPS29-208ENST00000550267 SMPD3Q9NY59 655 aaPredicted RBP7.64□□□□□ -1.19
VPS29-208ENST00000550267 PLA2G2DQ9UNK4 145 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 MRPS7Q9Y2R9 242 aaKnown RBP7.64□□□□□ -1.19
VPS29-208ENST00000550267 PRELID3BQ9Y3B1 194 aa7.64□□□□□ -1.19
VPS29-208ENST00000550267 IGHV4-4A0A075B6R2 117 aa7.63□□□□□ -1.19
VPS29-208ENST00000550267 IGKV1D-8A0A087WSZ0 117 aa7.63□□□□□ -1.19
VPS29-208ENST00000550267 M0R2N4 97 aa7.63□□□□□ -1.19
VPS29-208ENST00000550267 ATP5HO75947 161 aa7.63□□□□□ -1.19
VPS29-208ENST00000550267 CA1P00915 261 aaPredicted RBP7.63□□□□□ -1.19
VPS29-208ENST00000550267 UCHL1P09936 223 aa7.63□□□□□ -1.19
VPS29-208ENST00000550267 TFPI2P48307 235 aa7.63□□□□□ -1.19
VPS29-208ENST00000550267 RAB11BQ15907 218 aa7.63□□□□□ -1.19
VPS29-208ENST00000550267 OR4S2Q8NH73 311 aa7.63□□□□□ -1.19
VPS29-208ENST00000550267 RAB3CQ96E17 227 aa7.63□□□□□ -1.19
VPS29-208ENST00000550267 C20orf24Q9BUV8 137 aa7.63□□□□□ -1.19
VPS29-208ENST00000550267 AK6Q9Y3D8 172 aaKnown RBP7.63□□□□□ -1.19
VPS29-208ENST00000550267 IGKV3-7A0A075B6H7 116 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 A0A075B6Q4 140 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 OR2T8A6NH00 312 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 DENRO43583 198 aaKnown RBP7.62□□□□□ -1.19
VPS29-208ENST00000550267 IGLV2-14P01704 120 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 GNB3P16520 340 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 HLA-GP17693 338 aa7.62□□□□□ -1.19
VPS29-208ENST00000550267 PTBP1P26599 531 aaKnown RBP eCLIP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms