RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 PLEKHA2Q9HB19 425 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 ZMAT5Q9UDW3 170 aaKnown RBP10.46□□□□□ -0.73
NUP188-211ENST00000550219 WSB1Q9Y6I7 421 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 TMEM56-RWDD3S4R434 201 aa10.46□□□□□ -0.73
NUP188-211ENST00000550219 SRRM4A7MD48 611 aaKnown RBP10.45□□□□□ -0.74
NUP188-211ENST00000550219 H7C2Y5 167 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 ATP6V0E1O15342 81 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 PRAF2O60831 178 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 CDS2O95674 445 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 CRYZL1O95825 349 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 IGKV1-39P01597 117 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 IGHG4P01861 327 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 IGKV1D-39P04432 117 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 CNTFRP26992 372 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 LPAR6P43657 344 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 CDX1P47902 265 aaPredicted RBP10.45□□□□□ -0.74
NUP188-211ENST00000550219 LGALS7P47929 136 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 CBX3Q13185 183 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 POU2AF1Q16633 256 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 TRIM16LQ309B1 348 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 NPBQ8NG41 125 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 OR5B12Q96R08 314 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 COMMD9Q9P000 198 aa10.45□□□□□ -0.74
NUP188-211ENST00000550219 G3V318 75 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 S1PR2O95136 353 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 LY86O95711 162 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 DHFRP00374 187 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 IGLV2-23P01705 113 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 SERPINE2P07093 398 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 ANXA3P12429 323 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 VAMP1P23763 118 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 PSMB8P28062 276 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 RPS16P62249 146 aaKnown RBP10.44□□□□□ -0.74
NUP188-211ENST00000550219 ANKRD55Q3KP44 614 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 C4orf46Q504U0 113 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 SELENOHQ8IZQ5 122 aaKnown RBP10.44□□□□□ -0.74
NUP188-211ENST00000550219 RNF152Q8N8N0 203 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 LRTM2Q8N967 370 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 OR11H1Q8NG94 326 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 LHFPL5Q8TAF8 219 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 IL22RA2Q969J5 263 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 WWC2-AS2Q96NR7 200 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 SEC22CQ9BRL7 303 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 GNB4Q9HAV0 340 aa10.44□□□□□ -0.74
NUP188-211ENST00000550219 A0A0B4J2A0 478 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 C7orf66A4D0T2 115 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 SNRPGP15A8MWD9 76 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 SHOXO15266 292 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 NBR2O15453 112 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 NDUFA3O95167 84 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 SPDEFO95238 335 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 HLA-AP01891 365 aaKnown RBP10.43□□□□□ -0.74
NUP188-211ENST00000550219 IGF1P05019 195 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 CRYGBP07316 175 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 IL6RP08887 468 aaPredicted RBP10.43□□□□□ -0.74
NUP188-211ENST00000550219 NQO2P16083 231 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 SRPXP78539 464 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 ECSCRQ19T08 205 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 TMEM65Q6PI78 240 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 OR52B4Q8NGK2 314 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 ZNF431Q8TF32 576 aaPredicted RBP10.43□□□□□ -0.74
NUP188-211ENST00000550219 MITD1Q8WV92 249 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 SEC22AQ96IW7 307 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 HARBI1Q96MB7 349 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 TSNAXQ99598 290 aaKnown RBP10.43□□□□□ -0.74
NUP188-211ENST00000550219 AIFM2Q9BRQ8 373 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 KLK15Q9H2R5 256 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 KIAA1456Q9P272 454 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 SHPKQ9UHJ6 478 aa10.43□□□□□ -0.74
NUP188-211ENST00000550219 A0A0B4J293 547 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 PIGBOS1A0A0B4J2F0 54 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 HRASP01112 189 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 P0C879 139 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 UBE2KP61086 200 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 FHL3Q13643 280 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 PSG5Q15238 335 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 PUSL1Q8N0Z8 303 aaKnown RBP10.42□□□□□ -0.74
NUP188-211ENST00000550219 LGI3Q8N145 548 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 TEX45Q8NA69 505 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 ABHD5Q8WTS1 349 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 CASTOR1Q8WTX7 329 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 RBPMSQ93062 196 aaKnown RBP10.42□□□□□ -0.74
NUP188-211ENST00000550219 RHOVQ96L33 236 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 ASCL2Q99929 193 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 OR51J1Q9H342 316 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 GPN1Q9HCN4 374 aaPredicted RBP10.42□□□□□ -0.74
NUP188-211ENST00000550219 PRR13Q9NZ81 148 aa10.42□□□□□ -0.74
NUP188-211ENST00000550219 IGHV7-81A0A0B4J1V7 117 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 TRAV41A0A0B4J266 112 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 DUXBA0A1W2PPF3 345 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 DBX1A6NMT0 343 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 MARCH11A6NNE9 402 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 RRHO14718 337 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 ATG12O94817 140 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 IGKV1-5P01602 117 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 HLA-DRB1P01911 266 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 GNB1P62873 340 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 PLGLAQ15195 96 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 TATDN3Q17R31 274 aa10.41□□□□□ -0.74
NUP188-211ENST00000550219 C5orf64Q2M2E5 130 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms