RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 ACSM3Q53FZ2 586 aa7.85□□□□□ -1.15
TRAFD1-206ENST00000549358 PLAC9Q5JTB6 97 aa7.85□□□□□ -1.15
TRAFD1-206ENST00000549358 RBM48Q5RL73 367 aaKnown RBP7.85□□□□□ -1.15
TRAFD1-206ENST00000549358 MAFIPQ8WZ33 124 aa7.85□□□□□ -1.15
TRAFD1-206ENST00000549358 CABLES2Q9BTV7 478 aa7.85□□□□□ -1.15
TRAFD1-206ENST00000549358 C20orf24Q9BUV8 137 aa7.85□□□□□ -1.15
TRAFD1-206ENST00000549358 IGKV3-7A0A075B6H7 116 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 OR2T8A6NH00 312 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 TGOLN2O43493 480 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 MRPS14O60783 128 aaKnown RBP7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 CD1AP06126 327 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 RBMY1A1P0DJD3 496 aaKnown RBP7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 RBMY1CP0DJD4 496 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 PTBP1P26599 531 aaKnown RBP eCLIP7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 MAS1LP35410 378 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 RPL30P62888 115 aaKnown RBP7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 TNP2Q05952 138 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 ARFRP1Q13795 201 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 RBMY1FQ15415 496 aaKnown RBP7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 LGALS9BQ3B8N2 356 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 KCTD9Q7L273 389 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 CENPSQ8N2Z9 138 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 Q8NAQ8 132 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 VSTM2AQ8TAG5 236 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 TMEM167AQ8TBQ9 72 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 PHYHIPQ92561 330 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 RNF2Q99496 336 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 CHRDL1Q9BU40 450 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 RNF126Q9BV68 326 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 PFDN2Q9UHV9 154 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 PRELID3BQ9Y3B1 194 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 HSPG2P98160 4391 aa7.84□□□□□ -1.15
TRAFD1-206ENST00000549358 IGHV4-28A0A0C4DH34 117 aa7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 CGB1A6NKQ9 187 aa7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 FCGR3AP08637 254 aa7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 CD37P11049 281 aa7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 ST3GAL4Q11206 333 aa7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 PUSL1Q8N0Z8 303 aaKnown RBP7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 PLGRKTQ9HBL7 147 aa7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 THYN1Q9P016 225 aa7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 MRPS7Q9Y2R9 242 aaKnown RBP7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 KCNK7Q9Y2U2 307 aa7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 ETV7Q9Y603 341 aa7.83□□□□□ -1.16
TRAFD1-206ENST00000549358 IGLV2-18A0A075B6J9 118 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 DEFB131BA0A096LNP1 70 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 EFCAB10A6NFE3 127 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 C15orf61A6NNL5 157 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 K7EMT4 169 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 NDUFA4O00483 81 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 CDK2AP2O75956 126 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 DIRAS3O95661 229 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 CDK1P06493 297 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 HLA-GP17693 338 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 RPL8P62917 257 aaKnown RBP7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 HSD17B12Q53GQ0 312 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 ZNF767PQ75MW2 155 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 H1FOOQ8IZA3 346 aaPredicted RBP7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 GBGT1Q8N5D6 347 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 ZNF555Q8NEP9 628 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 OR56B1Q8NGI3 324 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 OR4S2Q8NH73 311 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 C9orf16Q9BUW7 83 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 SMPXQ9UHP9 88 aa7.82□□□□□ -1.16
TRAFD1-206ENST00000549358 ELOA3CA0A087WX78 387 aaPredicted RBP7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 IGHV3-49A0A0A0MS15 119 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 C16orf90A8MZG2 172 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 CIB2O75838 187 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 IFNA10P01566 189 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 RASSF2P50749 326 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 WNT4P56705 351 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 CLDN12P56749 244 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 BRWD1-AS2P59051 145 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 IRF3Q14653 427 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 SOHLH1Q5JUK2 328 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 MS4A15Q8N5U1 240 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 VN1R17PQ8TDU5 208 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 TCTEX1D2Q8WW35 142 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 RAB3CQ96E17 227 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 BSCL2Q96G97 398 aaPredicted RBP7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 NDUFAF3Q9BU61 184 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 RHPN1-AS1Q9BWJ2 59 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 SCRT1Q9BWW7 348 aa7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 RBMX2Q9Y388 322 aaKnown RBP7.81□□□□□ -1.16
TRAFD1-206ENST00000549358 A0A075B6Q4 140 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 IGKV1D-8A0A087WSZ0 117 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 C15orf62A8K5M9 175 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 SLC17A2O00624 439 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 CHEK1O14757 476 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 MYL12BO14950 172 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 DENRO43583 198 aaKnown RBP7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 IFNA21P01568 189 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 IFNA17P01571 189 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 IGLV2-14P01704 120 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 AMBPP02760 352 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 MIFP14174 115 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 CD36P16671 472 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 OR2B8PP59922 312 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 PLA2G7Q13093 441 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 C2orf76Q3KRA6 126 aa7.8□□□□□ -1.16
TRAFD1-206ENST00000549358 LEMD1Q68G75 181 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms