RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 LYSMD2Q8IV50 215 aa14.18□□□□□ -0.14
CHMP1A-207ENST00000549328 Q8N402 240 aa14.18□□□□□ -0.14
CHMP1A-207ENST00000549328 OR2K2Q8NGT1 345 aa14.18□□□□□ -0.14
CHMP1A-207ENST00000549328 GPX8Q8TED1 209 aa14.18□□□□□ -0.14
CHMP1A-207ENST00000549328 SRSF8Q9BRL6 282 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-207ENST00000549328 CGB1A6NKQ9 187 aa14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 GGCTO75223 188 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 PGLYRP1O75594 196 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 IGHV4-30-4P0DP06 118 aa14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 F2RP25116 425 aa14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 SGPP2Q8IWX5 399 aa14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 CMTM1Q8IZ96 169 aa14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 CADM3Q8N126 398 aa14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 DMBX1Q8NFW5 382 aa14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 COMMD5Q9GZQ3 224 aa14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 SCPEP1Q9HB40 452 aa14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 C19orf73Q9NVV2 129 aa14.17□□□□□ -0.14
CHMP1A-207ENST00000549328 S1PR2O95136 353 aa14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 NDUFB8O95169 186 aa14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 DEFA4P12838 97 aa14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 MYOD1P15172 320 aa14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 HRH1P35367 487 aa14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 RORCP51449 518 aa14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 THOC7Q6I9Y2 204 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 C19orf35Q6ZS72 473 aa14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 THAP7Q9BT49 309 aaPredicted RBP14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 ZMAT4Q9H898 229 aa14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 TMEM140Q9NV12 185 aa14.16□□□□□ -0.14
CHMP1A-207ENST00000549328 IGLV11-55A0A075B6I3 123 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 TRAV3A0A0B4J244 114 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 IGLC7A0M8Q6 106 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 PPP5D1E7EU14 171 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 LGALS9O00182 355 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 RLN1P04808 185 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 HLA-DMAP28067 261 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 ERVK-16P61578 105 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 LPCAT3Q6P1A2 487 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 GTSCR1Q86UQ5 136 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 GPHB5Q86YW7 130 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 EEF1AKMT3Q96AZ1 226 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 DGCR14Q96DF8 476 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 CXorf58Q96LI9 332 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 CCDC140Q96MF4 163 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 RCHY1Q96PM5 261 aa14.15□□□□□ -0.14
CHMP1A-207ENST00000549328 TRBV7-1A0A0A6YYK4 115 aa14.14□□□□□ -0.15
CHMP1A-207ENST00000549328 MARCH11A6NNE9 402 aa14.14□□□□□ -0.15
CHMP1A-207ENST00000549328 GPR31O00270 319 aa14.14□□□□□ -0.15
CHMP1A-207ENST00000549328 OR2C1O95371 312 aa14.14□□□□□ -0.15
CHMP1A-207ENST00000549328 ELK1P19419 428 aa14.14□□□□□ -0.15
CHMP1A-207ENST00000549328 ADAMTSL5Q6ZMM2 481 aa14.14□□□□□ -0.15
CHMP1A-207ENST00000549328 HSD17B13Q7Z5P4 300 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-207ENST00000549328 QTRT1Q9BXR0 403 aaKnown RBP14.14□□□□□ -0.15
CHMP1A-207ENST00000549328 IZUMO1RA6ND01 250 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 HPGDSO60760 199 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 HLA-AP01891 365 aaKnown RBP14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 REG1AP05451 166 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 ARL3P36405 182 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 LPAR6P43657 344 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 TSPAN5P62079 268 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 MZT2AQ6P582 158 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 CLEC19AQ6UXS0 136 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 SNX29P2Q8IUI4 249 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 LAX1Q8IWV1 398 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 FCAMRQ8WWV6 532 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 TM2D3Q9BRN9 247 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 FXYD6Q9H0Q3 95 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 FAM212BQ9NTI7 297 aaPredicted RBP14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 THYN1Q9P016 225 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 NBEAL2Q6ZNJ1 2754 aa14.13□□□□□ -0.15
CHMP1A-207ENST00000549328 C2orf70A6NJV1 201 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 C3orf84H3BNL1 204 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 CYB5BO43169 146 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 GABARAPO95166 117 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 TRAPPC2P0DI81 140 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 TRAPPC2BP0DI82 140 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 FOLR2P14207 255 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 S100GP29377 79 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 RCVRNP35243 200 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 CTF1Q16619 201 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 DEFB114Q30KQ6 69 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 CD300EQ496F6 205 aaPredicted RBP14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 FAM106AQ4KMX7 169 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 ZNF585BQ52M93 769 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 OR1L8Q8NGR8 309 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 AP3S1Q92572 193 aa14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 TECRQ9NZ01 308 aaKnown RBP14.12□□□□□ -0.15
CHMP1A-207ENST00000549328 TEX50A0A1B0GTY4 177 aa14.11□□□□□ -0.15
CHMP1A-207ENST00000549328 KRASP01116 189 aa14.11□□□□□ -0.15
CHMP1A-207ENST00000549328 IGHV3-23P01764 117 aa14.11□□□□□ -0.15
CHMP1A-207ENST00000549328 SMIM18P0DKX4 95 aa14.11□□□□□ -0.15
CHMP1A-207ENST00000549328 RPA2P15927 270 aa14.11□□□□□ -0.15
CHMP1A-207ENST00000549328 UCP3P55916 312 aa14.11□□□□□ -0.15
CHMP1A-207ENST00000549328 OR10W1Q8NGF6 305 aa14.11□□□□□ -0.15
CHMP1A-207ENST00000549328 DYNLRB2Q8TF09 96 aa14.11□□□□□ -0.15
CHMP1A-207ENST00000549328 S4R3C0 116 aa14.11□□□□□ -0.15
CHMP1A-207ENST00000549328 MFSD2BA6NFX1 497 aa14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 SNAPC5O75971 98 aa14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 TPPPO94811 219 aa14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 CLEC3BP05452 202 aa14.1□□□□□ -0.15
CHMP1A-207ENST00000549328 SERPINE2P07093 398 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms