RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TCF19Q9Y242 345 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 INTS1Q8N201 2190 aaKnown RBP11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZNF891A8MT65 544 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 ACTL6BO94805 426 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 RPL29P47914 159 aaKnown RBP11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 YPEL3P61236 119 aaPredicted RBP11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 FAM90A1Q86YD7 464 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 STPG3Q8N7X2 389 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 CLCF1Q9UBD9 225 aa11.67□□□□□ -0.54
RAPGEF3-218ENST00000548919 TMEM265A0A087WTH1 108 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 SERF1AO75920 110 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 OR10J1P30954 320 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 TOMM20LQ6UXN7 152 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 OR4P4Q8NGL7 312 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZCCHC14Q8WYQ9 949 aaKnown RBP11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 S1PR3Q99500 378 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 MRPL18Q9H0U6 180 aaKnown RBP11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 IFI27L2Q9H2X8 130 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 LSM4Q9Y4Z0 139 aaKnown RBP11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 TNCP24821 2201 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 KIR2DL5BA0A0G2JN68 375 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 KIR2DL5BA0A0G2JPC4 375 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 AHRRA9YTQ3 701 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 SPINK4O60575 86 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 CGAP01215 116 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 CDKN1AP38936 164 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 CASP6P55212 293 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 LOXL3P58215 753 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 KRTCAP3Q53RY4 240 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 KIR2DL5AQ8N109 375 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 HINT2Q9BX68 163 aa11.66□□□□□ -0.54
RAPGEF3-218ENST00000548919 KIR2DL2P43627 348 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 IER3P46695 156 aa11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 TMPRSS3P57727 454 aa11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 NPVFQ9HCQ7 196 aa11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 ZNF705AQ6ZN79 300 aaPredicted RBP11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 C9orf106Q8NAJ2 232 aa11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 OR1L6Q8NGR2 347 aa11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 BTF3L4Q96K17 158 aa11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 HSPB9Q9BQS6 159 aa11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 TMEM106BQ9NUM4 274 aa11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 IL36BQ9NZH7 164 aa11.65□□□□□ -0.54
RAPGEF3-218ENST00000548919 M0R143 59 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 FOSL1P15407 271 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 CRISP2P16562 243 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 IGFBP2P18065 325 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 MSMPQ1L6U9 139 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 FAM201AQ5SY85 155 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 MOB3BQ86TA1 216 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 JPT1Q9UK76 154 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 FCN1O00602 326 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 CA2P00918 260 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 TMEM178AQ8NBL3 297 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 OR52E5Q8NH55 327 aa11.64□□□□□ -0.55
RAPGEF3-218ENST00000548919 IGHV2OR16-5A0A0B4J2B6 119 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 FAM90A9PA6NNJ1 464 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 YPEL1O60688 119 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 CD59P13987 128 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 NPY1RP25929 384 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 SELENOTP62341 195 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 RHOBP62745 196 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 SLC35B1P78383 322 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 SLC24A4Q8NFF2 622 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 YPEL2Q96QA6 119 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 TXNDC17Q9BRA2 123 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 IGHV1-18A0A0C4DH31 117 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 RAB4AP20338 218 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 TNFSF10P50591 281 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 TDGF1P3P51864 188 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 LGALS4P56470 323 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 CYB5R2Q6BCY4 276 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 OR4A47Q6IF82 309 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 TRAT1Q6PIZ9 186 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 BAGE3Q86Y29 109 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 BAGE2Q86Y30 109 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 OR8I2Q8N0Y5 310 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 EAF1Q96JC9 268 aaPredicted RBP11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 PAM16Q9Y3D7 125 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 DSCAMO60469 2012 aa11.63□□□□□ -0.55
RAPGEF3-218ENST00000548919 SNURFLB1AK76 121 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 GATA2P23769 480 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 TPPP2P59282 170 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 SRSF6Q13247 344 aaKnown RBP11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 TPTE2P1Q5T6R2 138 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 DUX4L9Q6RFH8 374 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 MMD2Q8IY49 270 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 GCSAMQ8N6F7 178 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 VN1R17PQ8TDU5 208 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 FAM216AQ8WUB2 273 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 DDB2Q92466 427 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 OPN3Q9H1Y3 402 aaPredicted RBP11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 PARD6AQ9NPB6 346 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 RNF114Q9Y508 228 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 SAA2-SAA4A0A096LPE2 208 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 PCNX2A6NKB5 2137 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 C15orf61A6NNL5 157 aa11.62□□□□□ -0.55
RAPGEF3-218ENST00000548919 ZNF883P0CG24 379 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms