RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 TPRX1Q8N7U7 411 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 STPG3Q8N7X2 389 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 OR4P4Q8NGL7 312 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 OR52E5Q8NH55 327 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 BCL2L2Q92843 193 aaPredicted RBP11.77□□□□□ -0.53
SRP54-202ENST00000546080 J3QW42 95 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 NTN3O00634 580 aaPredicted RBP11.77□□□□□ -0.53
SRP54-202ENST00000546080 GFRA3O60609 400 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 AREGP15514 252 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 DUTP33316 252 aaKnown RBP11.77□□□□□ -0.53
SRP54-202ENST00000546080 ZNF83P51522 516 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 LTC4SQ16873 150 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 Q6ZR03 302 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 GCNT2Q8N0V5 402 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 KLHDC1Q8N7A1 406 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 OR13A1Q8NGR1 328 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 HES7Q9BYE0 225 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 FAM234AQ9H0X4 552 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 ZNF576Q9H609 170 aa11.77□□□□□ -0.53
SRP54-202ENST00000546080 LSM4Q9Y4Z0 139 aaKnown RBP11.77□□□□□ -0.53
SRP54-202ENST00000546080 HELTA6NFD8 242 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 CGAP01215 116 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 TFF1P04155 84 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 OR10J4P0C629 311 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 C3orf79P0CE67 100 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 SRIP30626 198 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 HOXA4Q00056 320 aaPredicted RBP11.76□□□□□ -0.53
SRP54-202ENST00000546080 TEPPQ6URK8 271 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 ZNF826PQ6ZT77 177 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 ORAOV1Q8WV07 137 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 RNASE7Q9H1E1 156 aaKnown RBP11.76□□□□□ -0.53
SRP54-202ENST00000546080 OBP2BQ9NPH6 170 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 TUBG2Q9NRH3 451 aa11.76□□□□□ -0.53
SRP54-202ENST00000546080 DPRXA6NFQ7 191 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 ZNF891A8MT65 544 aaPredicted RBP11.75□□□□□ -0.53
SRP54-202ENST00000546080 SPINT2O43291 252 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 AMY1AP04745 511 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 CELA3BP08861 270 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 PTTG1IPP53801 180 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 SLC35B1P78383 322 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 RAB31Q13636 194 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 FXYD3Q14802 87 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 PQLC2Q6ZP29 291 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 DOLPP1Q86YN1 238 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 VKORC1L1Q8N0U8 176 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 SLC25A40Q8TBP6 338 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 C1orf159Q96HA4 380 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 TRAV34A0A0B4J273 112 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 IQCF6A8MYZ5 107 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 HLA-DQA1P01909 254 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 IGFBP4P22692 258 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 GNG10P50151 68 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 PRRX1P54821 245 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 TCL1AP56279 114 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 SSPNQ14714 243 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 BORCS7Q96B45 105 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 TTTY12Q9BZ98 90 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 WNT10AQ9GZT5 417 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 OSTCQ9NRP0 149 aa11.75□□□□□ -0.53
SRP54-202ENST00000546080 REG1AP05451 166 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 ADH4P08319 380 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 CRYBB3P26998 211 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 TIGITQ495A1 244 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 MRPL54Q6P161 138 aaKnown RBP11.74□□□□□ -0.53
SRP54-202ENST00000546080 ACP7Q6ZNF0 438 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 C19orf35Q6ZS72 473 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 Q8TCH9 128 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 PLPPR2Q96GM1 343 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 CDX2Q99626 313 aaPredicted RBP11.74□□□□□ -0.53
SRP54-202ENST00000546080 IL19Q9UHD0 177 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 TCF19Q9Y242 345 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 ARL2-SNX15V9GYD0 113 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 CACNA1EQ15878 2313 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 TRAV3A0A0B4J244 114 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.74□□□□□ -0.53
SRP54-202ENST00000546080 M0R1X1 148 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 BMPR1BO00238 502 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 ACTL6BO94805 426 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 RELBQ01201 579 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 PSG5Q15238 335 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 LEMD1Q68G75 181 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 MIR17HGQ75NE6 70 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 NIT1Q86X76 327 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 PRR7Q8TB68 274 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 CT55Q8WUE5 264 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 SLC35D1Q9NTN3 355 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 METRNQ9UJH8 293 aa11.74□□□□□ -0.53
SRP54-202ENST00000546080 TRGV8A0A0C4DH27 118 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 CCL25O15444 150 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 TNFSF15O95150 251 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 CA2P00918 260 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 CFIP05156 583 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 SP1P08047 785 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 NTF3P20783 257 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 COL8A2P25067 703 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 FAM19A2Q8N3H0 131 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 TMEM251Q8N6I4 163 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 TSKUQ8WUA8 353 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 TMEM167BQ9NRX6 74 aa11.73□□□□□ -0.53
SRP54-202ENST00000546080 TMEM140Q9NV12 185 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms