RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 FOXF2Q12947 444 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 PSG7Q13046 419 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 GUSBP1Q15486 140 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 RPEL1Q2QD12 228 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 C19orf54Q5BKX5 351 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 SPATA46Q5T0L3 261 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 C9orf135Q5VTT2 229 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 WDR82Q6UXN9 313 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 C11orf53Q8IXP5 236 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 BCL6BQ8N143 479 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-225ENST00000545920 BATF2Q8N1L9 274 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 NECAP1Q8NC96 275 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 KLF14Q8TD94 323 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-225ENST00000545920 SMIM12Q96EX1 92 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 COQ2Q96H96 371 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 LOXL4Q96JB6 756 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 ELOVL1Q9BW60 279 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 MRPL32Q9BYC8 188 aaKnown RBP5.35□□□□□ -1.55
SNHG1-225ENST00000545920 COMMD5Q9GZQ3 224 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 ZNF586Q9NXT0 402 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 CLCF1Q9UBD9 225 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 IL19Q9UHD0 177 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 PLA2G2DQ9UNK4 145 aa5.35□□□□□ -1.55
SNHG1-225ENST00000545920 TRANK1O15050 2925 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 LNP1A1A4G5 178 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 FAM166BA8MTA8 275 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 SRRM5B3KS81 715 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 ISLRO14498 428 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 TIMM8AO60220 97 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-225ENST00000545920 IGLV1-44P01699 117 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 RNASE1P07998 156 aaKnown RBP5.34□□□□□ -1.55
SNHG1-225ENST00000545920 ARL14EPLP0DKL9 152 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 NPY1RP25929 384 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 BRS3P32247 399 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 CHRNA7P36544 502 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 FOXG1P55316 489 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-225ENST00000545920 EDDM3BP56851 147 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 CX3CL1P78423 397 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 PMP22Q01453 160 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 RTP5Q14D33 572 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 TIGITQ495A1 244 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 MORN2Q502X0 79 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 C19orf35Q6ZS72 473 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 C5orf24Q7Z6I8 188 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 ZNF808Q8N4W9 903 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-225ENST00000545920 KLHDC1Q8N7A1 406 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 OR5AU1Q8NGC0 362 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 OR52L2PQ8NGH6 319 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 WIPF2Q8TF74 440 aaPredicted RBP5.34□□□□□ -1.55
SNHG1-225ENST00000545920 CACNG8Q8WXS5 425 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 NEUROG1Q92886 237 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 C5orf30Q96GV9 206 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 MGST2Q99735 147 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 FAM234AQ9H0X4 552 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 LINC00574Q9H8X3 128 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 TMEM14BQ9NUH8 114 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 TECRQ9NZ01 308 aaKnown RBP5.34□□□□□ -1.55
SNHG1-225ENST00000545920 MRPL27Q9P0M9 148 aaKnown RBP5.34□□□□□ -1.55
SNHG1-225ENST00000545920 GNG12Q9UBI6 72 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 PSG11Q9UQ72 335 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 TCF19Q9Y242 345 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 KMT2EQ8IZD2 1858 aa5.34□□□□□ -1.55
SNHG1-225ENST00000545920 LINC00473A8K010 186 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 FCGR3BO75015 233 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 GRPP07492 148 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 IL6RP08887 468 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-225ENST00000545920 OR9G9P0C7N8 305 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 NDUFB7P17568 137 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 IGHV1-2P23083 117 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 PRDX2P32119 198 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 ATP5G3P48201 142 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 GNG4P50150 75 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 TDGF1P3P51864 188 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 TLE1Q04724 770 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 AESQ08117 197 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 EFNB3Q15768 340 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 C2orf83Q53S99 150 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 TMEM200BQ69YZ2 307 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 FAM231DQ6ZW35 169 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 SSX8Q7RTT4 187 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 MYPOPQ86VE0 399 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-225ENST00000545920 TGIF2LXQ8IUE1 241 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 SIGLECL1Q8N7X8 197 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 RNF152Q8N8N0 203 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 SLC24A4Q8NFF2 622 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 OR13A1Q8NGR1 328 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 OR5B3Q8NH48 314 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 OCC1Q8TAD7 63 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 MRGPRDQ8TDS7 321 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 DDB2Q92466 427 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 TMEM68Q96MH6 324 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 RBM14Q96PK6 669 aaKnown RBP5.33□□□□□ -1.56
SNHG1-225ENST00000545920 VAMP8Q9BV40 100 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 SNHG12Q9BXW3 62 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 TMEM140Q9NV12 185 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 SOX21Q9Y651 276 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-225ENST00000545920 MYO9BQ13459 2157 aa5.33□□□□□ -1.56
SNHG1-225ENST00000545920 BRWD1Q9NSI6 2320 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms