RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 CDCP2Q5VXM1 449 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 MBNL2Q5VZF2 373 aaKnown RBP9.99□□□□□ -0.81
CIT-217ENST00000545913 LMX1BO60663 402 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 ZG16O60844 167 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 PRSS2P07478 247 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 NUTF2P61970 127 aaKnown RBP9.99□□□□□ -0.81
CIT-217ENST00000545913 ZNF818PQ6ZRF7 136 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 OR5P3Q8WZ94 311 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 LINC00470Q9BZP3 86 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 SH3BGRL3Q9H299 93 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 SLC25A38Q96DW6 304 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 GLRXP35754 106 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 SAPCD1Q5SSQ6 148 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 ZNF98A6NK75 572 aa9.99□□□□□ -0.81
CIT-217ENST00000545913 APOBEC3AP31941 199 aaPredicted RBP9.98□□□□□ -0.81
CIT-217ENST00000545913 MRAP2Q96G30 205 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 PARLQ9H300 379 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 TCF21O43680 179 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 NPBWR2P48146 333 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 C2orf88Q9BSF0 95 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 GLIPR1P48060 266 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 TMEM136Q6ZRR5 245 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 CENPVQ7Z7K6 275 aaPredicted RBP9.98□□□□□ -0.81
CIT-217ENST00000545913 CA7P43166 264 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 SLC25A34Q6PIV7 304 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 DYSFO75923 2080 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 RNASE1P07998 156 aaKnown RBP9.98□□□□□ -0.81
CIT-217ENST00000545913 SP9P0CG40 484 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 FXYD3Q14802 87 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 LINC00305Q7Z4B0 112 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 A0A1W2PQM1 296 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 CRYBB3P26998 211 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 SRIP30626 198 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 H2BFSP57053 126 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 HBBP68871 147 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 OR4D5Q8NGN0 318 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 GGACTQ9BVM4 153 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 EML6Q6ZMW3 1958 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 COL4A5P29400 1685 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 A0A0B4J293 547 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 HAX1O00165 279 aa9.98□□□□□ -0.81
CIT-217ENST00000545913 GPX4P36969 197 aaPredicted RBP9.98□□□□□ -0.81
CIT-217ENST00000545913 NAT1P18440 290 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 IFITM3Q01628 133 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 TMEM187Q14656 261 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 ASPHD2Q6ICH7 369 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 LEAP2Q969E1 77 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 HIST1H2BAQ96A08 127 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 GOLT1AQ6ZVE7 132 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 TLNRD1Q9H1K6 362 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 IGKV3D-11A0A0A0MRZ8 115 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 NPFFO15130 113 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 IGKV3-11P04433 115 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 IL4P05112 153 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 SAMD13Q5VXD3 122 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 C1orf162Q8NEQ5 155 aaPredicted RBP9.97□□□□□ -0.81
CIT-217ENST00000545913 GATAD1Q8WUU5 269 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 NABP2Q9BQ15 211 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 H7C1H1 209 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 RND3P61587 244 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 DRAM1Q8N682 238 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 USF3Q68DE3 2245 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 CENPWQ5EE01 88 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 NLRC5Q86WI3 1866 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 LNP1A1A4G5 178 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 PF4P02776 101 aa9.97□□□□□ -0.81
CIT-217ENST00000545913 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.97□□□□□ -0.81
CIT-217ENST00000545913 KIF26AQ9ULI4 1882 aaPredicted RBP9.96□□□□□ -0.81
CIT-217ENST00000545913 KLRB1Q12918 225 aa9.96□□□□□ -0.81
CIT-217ENST00000545913 NRN1LQ496H8 165 aa9.96□□□□□ -0.81
CIT-217ENST00000545913 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.81
CIT-217ENST00000545913 GPHA2Q96T91 129 aa9.96□□□□□ -0.81
CIT-217ENST00000545913 RARRES2Q99969 163 aa9.96□□□□□ -0.81
CIT-217ENST00000545913 MRPL13Q9BYD1 178 aaKnown RBP9.96□□□□□ -0.81
CIT-217ENST00000545913 TMEM250H0YL14 139 aa9.96□□□□□ -0.81
CIT-217ENST00000545913 H0YL77 283 aa9.96□□□□□ -0.81
CIT-217ENST00000545913 PLAURQ03405 335 aa9.96□□□□□ -0.81
CIT-217ENST00000545913 LY6EQ16553 131 aa9.96□□□□□ -0.81
CIT-217ENST00000545913 ATRXP46100 2492 aa9.96□□□□□ -0.81
CIT-217ENST00000545913 PUSL1Q8N0Z8 303 aaKnown RBP9.96□□□□□ -0.81
CIT-217ENST00000545913 RLFQ13129 1914 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 IGKV1D-42A0A075B6H8 117 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 TGIF2-C20orf24A0A0A6YYL0 155 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 GCM2O75603 506 aaPredicted RBP9.96□□□□□ -0.82
CIT-217ENST00000545913 VENTXO95231 258 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 CD8AP01732 235 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 ZNF385CQ66K41 422 aaPredicted RBP9.96□□□□□ -0.82
CIT-217ENST00000545913 ACP7Q6ZNF0 438 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 A0A0G2JLM5 398 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 MDKP21741 143 aaPredicted RBP9.96□□□□□ -0.82
CIT-217ENST00000545913 SPRED2Q7Z698 418 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 TIMP4Q99727 224 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 TMEM14DPA8MWL7 114 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 SMUG1Q53HV7 270 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 MEIG1Q5JSS6 88 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 PNKDQ8N490 385 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 APCDD1LQ8NCL9 501 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 FDCSPQ8NFU4 85 aa9.96□□□□□ -0.82
CIT-217ENST00000545913 C7orf71A4D174 169 aa9.95□□□□□ -0.82
CIT-217ENST00000545913 GREM1O60565 184 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms