RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 FAM57AQ8TBR7 257 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 FBLL1A6NHQ2 334 aaKnown RBP10.57□□□□□ -0.72
COL4A6-209ENST00000545689 PRR32B1ATL7 298 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 K7ERU9 68 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 YPEL1O60688 119 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 NMUP48645 174 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 LINC00305Q7Z4B0 112 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 SRSF12Q8WXF0 261 aaKnown RBP10.57□□□□□ -0.72
COL4A6-209ENST00000545689 YPEL2Q96QA6 119 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 SDF2L1Q9HCN8 221 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 FOXH1O75593 365 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 CX3CL1P78423 397 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 ZNF841Q6ZN19 808 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 FMC1Q96HJ9 113 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 CHODLQ9H9P2 273 aa10.57□□□□□ -0.72
COL4A6-209ENST00000545689 IGKV1-9A0A0C4DH69 117 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 RBFOX2O43251 390 aaKnown RBP eCLIP10.56□□□□□ -0.72
COL4A6-209ENST00000545689 PDLIM4P50479 330 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 ZNF497Q6ZNH5 498 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 OR4C46A6NHA9 309 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 NPIPB6E9PJ23 425 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 KLRB1Q12918 225 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 PSG7Q13046 419 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 ZFP36L1Q07352 338 aaKnown RBP10.56□□□□□ -0.72
COL4A6-209ENST00000545689 MUC15Q8N387 334 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 ZNRF1Q8ND25 227 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 NEU4Q8WWR8 484 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-209ENST00000545689 GUCD1Q96NT3 240 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 PSMG4Q5JS54 123 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 CYB5R2Q6BCY4 276 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 C17orf82Q86X59 251 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-209ENST00000545689 ATG2BQ96BY7 2078 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 PIKFYVEQ9Y2I7 2098 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 CRYGSP22914 178 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 TAS2R60P59551 318 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 ACSF3Q4G176 576 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-209ENST00000545689 PNKDQ8N490 385 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 PAQR4Q8N4S7 273 aaPredicted RBP10.56□□□□□ -0.72
COL4A6-209ENST00000545689 FAM131CQ96AQ9 280 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 CKAP5Q14008 2032 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 DOCK3Q8IZD9 2030 aa10.56□□□□□ -0.72
COL4A6-209ENST00000545689 IGKV3D-15A0A087WSY6 115 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 TSPOP30536 169 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 TRPM7Q96QT4 1865 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 M0R3E3 92 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 TFF3Q07654 80 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 Q6AWC8 147 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 FAM53AQ6NSI3 398 aaPredicted RBP10.55□□□□□ -0.72
COL4A6-209ENST00000545689 WFDC3Q8IUB2 231 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 CCDC88CQ9P219 2028 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 DOCK4Q8N1I0 1966 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 PF4V1P10720 104 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 FAM209BQ5JX69 171 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 REC114Q7Z4M0 266 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 GREB1Q4ZG55 1949 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 GDF9O60383 454 aa10.55□□□□□ -0.72
COL4A6-209ENST00000545689 PLXNA3P51805 1871 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 COX6B1P14854 86 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 NPPCP23582 126 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 PLPPR1Q8TBJ4 325 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 IGKV3-7A0A075B6H7 116 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 PRR19A6NJB7 356 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 FABP2P12104 132 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 OR4D5Q8NGN0 318 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 OR1N2Q8NGR9 330 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 ZNF837Q96EG3 531 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-209ENST00000545689 SIAH2O43255 324 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 COPS9Q8WXC6 57 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 PEX7O00628 323 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 RRHO14718 337 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 LDLRAD4O15165 306 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 PHLDA3Q9Y5J5 127 aa10.54□□□□□ -0.72
COL4A6-209ENST00000545689 NTN3O00634 580 aaPredicted RBP10.54□□□□□ -0.72
COL4A6-209ENST00000545689 KNL1Q8NG31 2342 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 NUDT3O95989 172 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 REG1AP05451 166 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 ARF6P62330 175 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 ID3Q02535 119 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 GOLT1AQ6ZVE7 132 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 DPM3Q9P2X0 92 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 IGFBP2P18065 325 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 TBR1Q16650 682 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 DICER1Q9UPY3 1922 aaKnown RBP10.53□□□□□ -0.72
COL4A6-209ENST00000545689 A0A0A6YYD4 124 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 LOC105371267A0A1B0GV96 52 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 PROB1E7EW31 1015 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 IL4P05112 153 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 NBEAP1P0C6P0 100 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 ICAM4Q14773 271 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 ZNF324BQ6AW86 544 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-209ENST00000545689 TMEM144Q7Z5S9 345 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 RAB37Q96AX2 223 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 LHFPL1Q86WI0 220 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 RTN4RQ9BZR6 473 aa10.53□□□□□ -0.72
COL4A6-209ENST00000545689 AKIRIN1Q9H9L7 192 aaPredicted RBP10.53□□□□□ -0.72
COL4A6-209ENST00000545689 A0A1B0GW64 132 aa10.52□□□□□ -0.72
COL4A6-209ENST00000545689 C15orf61A6NNL5 157 aa10.52□□□□□ -0.72
COL4A6-209ENST00000545689 UPK2O00526 184 aa10.52□□□□□ -0.72
COL4A6-209ENST00000545689 TCF21O43680 179 aa10.52□□□□□ -0.72
COL4A6-209ENST00000545689 MST1P26927 711 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms