RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 OR5AP2Q8NGF4 316 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 TCTEX1D2Q8WW35 142 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 ACOT12Q8WYK0 555 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 DCUN1D4Q92564 292 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 SNAPC3Q92966 411 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 DLX4Q92988 240 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-223ENST00000545440 SLC25A46Q96AG3 418 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 S100A16Q96FQ6 103 aaKnown RBP5.9□□□□□ -1.46
SNHG1-223ENST00000545440 MS4A10Q96PG2 267 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 PHB2Q99623 299 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 SPIN2AQ99865 258 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 SPIN2BQ9BPZ2 258 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 ZNF430Q9H8G1 570 aaPredicted RBP5.9□□□□□ -1.46
SNHG1-223ENST00000545440 ZNF355PQ9NSJ1 428 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 TAS2R8Q9NYW2 309 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 ANAPC10Q9UM13 185 aa5.9□□□□□ -1.46
SNHG1-223ENST00000545440 MSGN1A6NI15 193 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 FAM223BA6NKX1 122 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 RBFOX2O43251 390 aaKnown RBP eCLIP5.89□□□□□ -1.47
SNHG1-223ENST00000545440 SAP30O75446 220 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 OR9G9P0C7N8 305 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 TAS2R46P59540 309 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 TAS2R20P59543 309 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 LSM3P62310 102 aaKnown RBP5.89□□□□□ -1.47
SNHG1-223ENST00000545440 CATR1Q13166 79 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 OR2B11Q5JQS5 317 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 ACSM6Q6P461 480 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 FAM223AQ8IWN6 122 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 PUSL1Q8N0Z8 303 aaKnown RBP5.89□□□□□ -1.47
SNHG1-223ENST00000545440 OR5T1Q8NG75 326 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 OR6Q1Q8NGQ2 317 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 SECTM1Q8WVN6 248 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 BORCS5Q969J3 196 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 USMG5Q96IX5 58 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 CMTM3Q96MX0 182 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 PRR25Q96S07 402 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 DCUN1D5Q9BTE7 237 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 FUNDC2Q9BWH2 189 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 RANGRFQ9HD47 186 aaPredicted RBP5.89□□□□□ -1.47
SNHG1-223ENST00000545440 IFT46Q9NQC8 304 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 COA4Q9NYJ1 87 aa5.89□□□□□ -1.47
SNHG1-223ENST00000545440 LSM4Q9Y4Z0 139 aaKnown RBP5.89□□□□□ -1.47
SNHG1-223ENST00000545440 OR2A4O95047 310 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 GABARAPO95166 117 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 TNFRSF6BO95407 300 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 HRASP01112 189 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 APOA1P02647 267 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 FGF2P09038 288 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 SMIM18P0DKX4 95 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 PTHLHP12272 177 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 MAS1LP35410 378 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 BRWD1-AS2P59051 145 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 HERV-K104P61576 105 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 NCS1P62166 190 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 C4orf46Q504U0 113 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 C10orf55Q5SWW7 151 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 ZNF343Q6P1L6 599 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 VKORC1L1Q8N0U8 176 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 TMEM167AQ8TBQ9 72 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 GIMAP1Q8WWP7 306 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 LINC00476Q8WZB0 136 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 OR2A7Q96R45 310 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 SLC5A7Q9GZV3 580 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 CCL28Q9NRJ3 127 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 BET1LQ9NYM9 111 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 EHFQ9NZC4 300 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 ZNF257Q9Y2Q1 563 aa5.88□□□□□ -1.47
SNHG1-223ENST00000545440 TRBV9A0A0B4J1U6 114 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 MEIS3P1A6NDR6 274 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 NPIPB5A8MRT5 1133 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 TNFSF12O43508 249 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 EIF4EP06730 217 aaKnown RBP5.87□□□□□ -1.47
SNHG1-223ENST00000545440 ZNF735P0CB33 412 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 APELAP0DMC3 54 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 PRSS3P35030 304 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 RPL27AP46776 148 aaKnown RBP5.87□□□□□ -1.47
SNHG1-223ENST00000545440 TAS2R31P59538 309 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 FXYD4P59646 89 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 VBP1P61758 197 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 RPL8P62917 257 aaKnown RBP5.87□□□□□ -1.47
SNHG1-223ENST00000545440 RHOGP84095 191 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 ZNF45Q02386 682 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 POU2AF1Q16633 256 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 VAX1Q5SQQ9 334 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 C11orf87Q6NUJ2 197 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 DHRS11Q6UWP2 260 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 ZNF818PQ6ZRF7 136 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 Q6ZWC4 215 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 SLC25A42Q86VD7 318 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 TMEM17Q86X19 198 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 SPAG16Q8N0X2 631 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 TTC9CQ8N5M4 171 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 NECAP1Q8NC96 275 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 OR5H2Q8NGV7 314 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 OR4A5Q8NH83 315 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 CD300LFQ8TDQ1 290 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 AP3S1Q92572 193 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 MOB3AQ96BX8 217 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 OR4C12Q96R67 309 aa5.87□□□□□ -1.47
SNHG1-223ENST00000545440 ELOVL1Q9BW60 279 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms