RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 C12orf74Q32Q52 190 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 VMA21Q3ZAQ7 101 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 FAM98BQ52LJ0 330 aaKnown RBP2.92□□□□□ -1.94
SNHG1-220ENST00000544550 AADACL4Q5VUY2 407 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 LPCAT4Q643R3 524 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 RAB12Q6IQ22 244 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 CLEC19AQ6UXS0 136 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 APRG1Q8IVJ8 170 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 TTC9CQ8N5M4 171 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 PRR26Q8N8Z3 221 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 OR10H4Q8NGA5 316 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 OR51A4Q8NGJ6 313 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 IL1F10Q8WWZ1 152 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 MRPL48Q96GC5 212 aaKnown RBP2.92□□□□□ -1.94
SNHG1-220ENST00000544550 CXorf58Q96LI9 332 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 DAZ1Q9NQZ3 744 aaKnown RBP2.92□□□□□ -1.94
SNHG1-220ENST00000544550 SLC35D1Q9NTN3 355 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF581Q9P0T4 197 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF221Q9UK13 617 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 PAM16Q9Y3D7 125 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 TMED3Q9Y3Q3 217 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 PEX16Q9Y5Y5 336 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 SELENOKQ9Y6D0 94 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 DNAH5Q8TE73 4624 aa2.92□□□□□ -1.94
SNHG1-220ENST00000544550 NBDYA0A0U1RRE5 68 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 TEX48A0A1B0GUV7 120 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 TMEM212A6NML5 194 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 GNGT2O14610 69 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 S1PR2O95136 353 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 CDRT1O95170 752 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 IGLV2-23P01705 113 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 PRH1P02810 166 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 CD5P06127 495 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 CD2P06729 351 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 SPP1P10451 314 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 HOXB6P17509 224 aaKnown RBP2.91□□□□□ -1.94
SNHG1-220ENST00000544550 FUT3P21217 361 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF93P35789 620 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-220ENST00000544550 UBE2KP61086 200 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 PPP3R1P63098 170 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 PJVKQ0ZLH3 352 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 MRPL28Q13084 256 aaKnown RBP2.91□□□□□ -1.94
SNHG1-220ENST00000544550 TPBGQ13641 420 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 PTGES3Q15185 160 aaKnown RBP2.91□□□□□ -1.94
SNHG1-220ENST00000544550 HMGN3Q15651 99 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 PRSS8Q16651 343 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 RTL8BQ17RB0 113 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 SLC22A6Q4U2R8 563 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 TP53I3Q53FA7 332 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 TMEM236Q5W0B7 351 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 MORN3Q6PF18 240 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-220ENST00000544550 UNQ9165/PRO28630Q6UXU0 137 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 STHQ8IWL8 128 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF383Q8NA42 475 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 DRAXINQ8NBI3 349 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-220ENST00000544550 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-220ENST00000544550 ACOT12Q8WYK0 555 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 TMEM190Q8WZ59 177 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 ABHD14BQ96IU4 210 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 NSL1Q96IY1 281 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 ATP6V1G3Q96LB4 118 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 C17orf77Q96MU5 243 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 ATG101Q9BSB4 218 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 AGMATQ9BSE5 352 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 CHRDL1Q9BU40 450 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 RIBC2Q9H4K1 309 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 TMEM138Q9NPI0 162 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 MGAT4AQ9UM21 535 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 DMBT1Q9UGM3 2413 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-220ENST00000544550 TNCP24821 2201 aa2.91□□□□□ -1.94
SNHG1-220ENST00000544550 A0A1B0GW64 132 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 DAPL1A0PJW8 107 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 TMEM189A5PLL7 270 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 OR4C45A6NMZ5 311 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 K7EMT4 169 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 DFFBO76075 338 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 CST1P01037 141 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 IGHV3-23P01764 117 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 CTSDP07339 412 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-220ENST00000544550 SPART-AS1P0CW21 52 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 ZBTB25P24278 435 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 PRDX6P30041 224 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 SNRPGP62308 76 aaKnown RBP2.9□□□□□ -1.95
SNHG1-220ENST00000544550 PAPPA-AS1Q5QFB9 102 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 DDI2Q5TDH0 399 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 PLET1Q6UQ28 207 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 MOB1BQ7L9L4 216 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 MMD2Q8IY49 270 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 C15orf53Q8NAA6 179 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 MRPL30Q8TCC3 161 aaKnown RBP2.9□□□□□ -1.95
SNHG1-220ENST00000544550 PTX4Q96A99 478 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 GRAMD2BQ96HH9 432 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 OR2A7Q96R45 310 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 IL4I1Q96RQ9 567 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 ZNF436Q9C0F3 470 aaPredicted RBP2.9□□□□□ -1.95
SNHG1-220ENST00000544550 SLC2A9Q9NRM0 540 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 TMEM14BQ9NUH8 114 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 THYN1Q9P016 225 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 GHRLQ9UBU3 117 aa2.9□□□□□ -1.95
SNHG1-220ENST00000544550 TBC1D24Q9ULP9 559 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms