RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 WBP1Q96G27 269 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 RPL24P83731 157 aaKnown RBP10.81□□□□□ -0.68
CHD4-211ENST00000544484 TRAV30A0A087WSZ9 112 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 M0R3E3 92 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 CX3CL1P78423 397 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 C2orf83Q53S99 150 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 RTBDNQ9BSG5 229 aaPredicted RBP10.81□□□□□ -0.68
CHD4-211ENST00000544484 ZNF319Q9P2F9 582 aa10.81□□□□□ -0.68
CHD4-211ENST00000544484 LYPD3O95274 346 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 CCL3L1P16619 93 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 AGAP20933 346 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 LINC00305Q7Z4B0 112 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 NPPCP23582 126 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 C1orf162Q8NEQ5 155 aaPredicted RBP10.8□□□□□ -0.68
CHD4-211ENST00000544484 PLPPR1Q8TBJ4 325 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 WFIKKN1Q96NZ8 548 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 FREM3P0C091 2139 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 MYO7BQ6PIF6 2116 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 EFEMP2O95967 443 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 IGKV1D-33P01593 117 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 IGKV1-33P01594 117 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 MRPL18Q9H0U6 180 aaKnown RBP10.8□□□□□ -0.68
CHD4-211ENST00000544484 PHLDA3Q9Y5J5 127 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 COMPP49747 757 aaPredicted RBP10.8□□□□□ -0.68
CHD4-211ENST00000544484 FAM209AQ5JX71 171 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 FOXD3Q9UJU5 478 aaPredicted RBP10.8□□□□□ -0.68
CHD4-211ENST00000544484 OR4A47Q6IF82 309 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 OR1N2Q8NGR9 330 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 LYZL4Q96KX0 146 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 DPM3Q9P2X0 92 aa10.8□□□□□ -0.68
CHD4-211ENST00000544484 IGKV1-9A0A0C4DH69 117 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 CDK2AP1O14519 115 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 AMY1AP04745 511 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 ANOS1P23352 680 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 RRN3P1Q2M238 152 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 FGFBP3Q8TAT2 258 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 CD8AP01732 235 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 IGFBP3P17936 291 aaPredicted RBP10.79□□□□□ -0.68
CHD4-211ENST00000544484 GCHFRP30047 84 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 KBTBD11-OT1A0A1B0GTJ5 212 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 LYNX1G3V0Z9 82 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 GPX1P07203 203 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 IL6RP08887 468 aaPredicted RBP10.79□□□□□ -0.68
CHD4-211ENST00000544484 LYNX1P0DP58 116 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 OTX1P32242 354 aaPredicted RBP10.79□□□□□ -0.68
CHD4-211ENST00000544484 FOXG1P55316 489 aaPredicted RBP10.79□□□□□ -0.68
CHD4-211ENST00000544484 TFF3Q07654 80 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 NRN1LQ496H8 165 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 C17orf100A8MU93 164 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 TRGV3P03979 118 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 MRPL20Q9BYC9 149 aaKnown RBP10.79□□□□□ -0.68
CHD4-211ENST00000544484 ABCA1O95477 2261 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 CACNA1BQ00975 2339 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 DOCK8Q8NF50 2099 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 CD59P13987 128 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 CD99P14209 185 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 IGFBP2P18065 325 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 RELQ04864 619 aaPredicted RBP10.79□□□□□ -0.68
CHD4-211ENST00000544484 ELOVL1Q9BW60 279 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 SPRR3Q9UBC9 169 aa10.79□□□□□ -0.68
CHD4-211ENST00000544484 PQLC2LA1A4F0 135 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 FOXI3A8MTJ6 420 aaPredicted RBP10.78□□□□□ -0.68
CHD4-211ENST00000544484 MT-ND6P03923 174 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 TMEM30BQ3MIR4 351 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 RCC1LQ96I51 464 aaKnown RBP10.78□□□□□ -0.68
CHD4-211ENST00000544484 KLK15Q9H2R5 256 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 IQCF6A8MYZ5 107 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 NPIPB7O75200 414 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 FAM74A4Q5TZK3 123 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 MBNL2Q5VZF2 373 aaKnown RBP10.78□□□□□ -0.68
CHD4-211ENST00000544484 EEF1AKMT3Q96AZ1 226 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 UCP1P25874 307 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 MST1P26927 711 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 LAMTOR1Q6IAA8 161 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 NPCDR1Q9BY65 106 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 THADAQ6YHU6 1953 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 ZNF25P17030 456 aaPredicted RBP10.78□□□□□ -0.68
CHD4-211ENST00000544484 GATA2P23769 480 aaPredicted RBP10.78□□□□□ -0.68
CHD4-211ENST00000544484 EFNA2O43921 213 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 ZNF324O75467 553 aaPredicted RBP10.78□□□□□ -0.68
CHD4-211ENST00000544484 SRIP30626 198 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 ICAM4Q14773 271 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 CYP2G1PQ6ZSU1 146 aa10.78□□□□□ -0.68
CHD4-211ENST00000544484 FOXA2Q9Y261 457 aaPredicted RBP10.78□□□□□ -0.68
CHD4-211ENST00000544484 MRPS18CQ9Y3D5 142 aaKnown RBP10.78□□□□□ -0.68
CHD4-211ENST00000544484 DIDO1Q9BTC0 2240 aaKnown RBP10.78□□□□□ -0.68
CHD4-211ENST00000544484 PSG9Q00887 426 aa10.77□□□□□ -0.68
CHD4-211ENST00000544484 LY6DQ14210 128 aa10.77□□□□□ -0.68
CHD4-211ENST00000544484 KLHDC3Q9BQ90 382 aa10.77□□□□□ -0.68
CHD4-211ENST00000544484 GRIFINA4D1Z8 144 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 HLA-DQA1P01909 254 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 OSR1Q8TAX0 266 aaPredicted RBP10.77□□□□□ -0.69
CHD4-211ENST00000544484 GATAD1Q8WUU5 269 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 DUX5Q96PT3 197 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 IGKV1D-13A0A0B4J2D9 117 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 NTN3O00634 580 aaPredicted RBP10.77□□□□□ -0.69
CHD4-211ENST00000544484 IGKV1-13P0DP09 117 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 CD24P25063 80 aa10.77□□□□□ -0.69
CHD4-211ENST00000544484 HIST1H1AQ02539 215 aaPredicted RBP10.77□□□□□ -0.69
CHD4-211ENST00000544484 ZFP30Q9Y2G7 519 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms