RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 G3V318 75 aa11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 OR2B8PP59922 312 aa11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 SSBP2P81877 361 aaPredicted RBP11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 DHRS2Q13268 280 aa11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ANKRD55Q3KP44 614 aa11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 UNQ5815/PRO19632Q6UWF5 114 aa11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 LYG2Q86SG7 212 aa11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ZNF329Q86UD4 541 aa11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 CADM3Q8N126 398 aa11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 SLC35G3Q8N808 338 aa11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 DUSP18Q8NEJ0 188 aa11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 FYTTD1Q96QD9 318 aaKnown RBP11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ALX4Q9H161 411 aaPredicted RBP11.4□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TNCP24821 2201 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 MSGN1A6NI15 193 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 APELAP0DMC3 54 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 EGR2P11161 476 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 MYOD1P15172 320 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 RPL27AP46776 148 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 IZUMO4Q1ZYL8 232 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 C10orf55Q5SWW7 151 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 FAM219AQ8IW50 185 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 LFNGQ8NES3 379 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 OR5AU1Q8NGC0 362 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 OR52B4Q8NGK2 314 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 WFDC12Q8WWY7 111 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 FKBP11Q9NYL4 201 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 PRNDQ9UKY0 176 aa11.39□□□□□ -0.59
TNFRSF1A-216ENST00000543995 A0A0B4J2A0 478 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 A0A1W2PN81 502 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 CHRNA7P36544 502 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 C10orf99Q6UWK7 81 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 LYZL2Q7Z4W2 148 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 C11orf44Q8N8P7 122 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 COQ8AQ8NI60 647 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 SPIN2AQ99865 258 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 SPIN2BQ9BPZ2 258 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 SHPKQ9UHJ6 478 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ZNF580Q9UK33 172 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 OR51B2Q9Y5P1 312 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ATRQ13535 2644 aa11.38□□□□□ -0.59
TNFRSF1A-216ENST00000543995 A0A0G2JRQ6 117 aa11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 DUS4LO95620 317 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 PTTG1O95997 202 aa11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 FGF2P09038 288 aa11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 MECP2P51608 486 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 AKIRIN2Q53H80 203 aa11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TET2Q6N021 2002 aaPredicted RBP11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 OR4X2Q8NGF9 303 aa11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 LSM10Q969L4 123 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TMEM68Q96MH6 324 aa11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 SEC22CQ9BRL7 303 aa11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 PDCD10Q9BUL8 212 aa11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 HINT2Q9BX68 163 aa11.37□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TEX50A0A1B0GTY4 177 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 DUXBA0A1W2PPF3 345 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 E7EUB6 86 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 INMT-MINDY4F8WBC2 141 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 FBXO24O75426 580 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 P0C879 139 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 CRIP2P52943 208 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 KRTAP10-3P60369 221 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 SRSF4Q08170 494 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TEX38Q6PEX7 206 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 LRTM2Q8N967 370 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 OR5T1Q8NG75 326 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 OR1L8Q8NGR8 309 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 GPR146Q96CH1 333 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 MARVELD1Q9BSK0 173 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ZNF747Q9BV97 191 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 QTRT1Q9BXR0 403 aaKnown RBP11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TMEM14BQ9NUH8 114 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 CACNG5Q9UF02 275 aa11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 FOXA2Q9Y261 457 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-216ENST00000543995 A0A0B4J293 547 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 HMX3A6NHT5 357 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 DBX1A6NMT0 343 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 DHFRP00374 187 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 HOXB5P09067 269 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TRAPPC2P0DI81 140 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TRAPPC2BP0DI82 140 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 CD28P10747 220 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 SPNP16150 400 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 PPIFP30405 207 aaKnown RBP11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 CFHR3Q02985 330 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 RGS21Q2M5E4 152 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TMEM65Q6PI78 240 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 COMMD1Q8N668 190 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 UXS1Q8NBZ7 420 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 OR5B3Q8NH48 314 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ZNF431Q8TF32 576 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 WIPF2Q8TF74 440 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 MITD1Q8WV92 249 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 GPN1Q9HCN4 374 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 ZNF355PQ9NSJ1 428 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 TEX22C9J3V5 150 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 IFNA17P01571 189 aa11.35□□□□□ -0.59
TNFRSF1A-216ENST00000543995 IL5P05113 134 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms