RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 CXorf66Q5JRM2 361 aaPredicted RBP11.78□□□□□ -0.52
CD9-210ENST00000543916 C18orf65Q6ZTR6 163 aa11.78□□□□□ -0.52
CD9-210ENST00000543916 GLYATL2Q8WU03 294 aa11.78□□□□□ -0.52
CD9-210ENST00000543916 SLC25A21Q9BQT8 299 aaPredicted RBP11.78□□□□□ -0.52
CD9-210ENST00000543916 C7orf50Q9BRJ6 194 aaKnown RBP11.78□□□□□ -0.52
CD9-210ENST00000543916 WDR12Q9GZL7 423 aaKnown RBP11.78□□□□□ -0.52
CD9-210ENST00000543916 TMEM222Q9H0R3 208 aa11.78□□□□□ -0.52
CD9-210ENST00000543916 NSG2Q9Y328 171 aa11.78□□□□□ -0.52
CD9-210ENST00000543916 PKD1L1Q8TDX9 2849 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 TNCP24821 2201 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 HMX3A6NHT5 357 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 B3GALNT1O75752 331 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 PF4V1P10720 104 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 RBMS2Q15434 407 aaKnown RBP11.77□□□□□ -0.53
CD9-210ENST00000543916 TRIM16LQ309B1 348 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 PRR31Q5SQ13 230 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 TMED4Q7Z7H5 227 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 SGPP2Q8IWX5 399 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 CADM3Q8N126 398 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 OR5T1Q8NG75 326 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 LHFPL5Q8TAF8 219 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 MYOZ3Q8TDC0 251 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 PRR13Q9NZ81 148 aa11.77□□□□□ -0.53
CD9-210ENST00000543916 DBX1A6NMT0 343 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 CENPXA8MT69 81 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 LYRM1O43325 122 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 NDUFB6O95139 128 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 FGF2P09038 288 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 P0C879 139 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 OR2B8PP59922 312 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 KIAA0141Q14154 515 aaPredicted RBP11.76□□□□□ -0.53
CD9-210ENST00000543916 IZUMO4Q1ZYL8 232 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 H2BFWTQ7Z2G1 175 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 OR5M8Q8NGP6 311 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 FAM110DQ8TAY7 271 aaPredicted RBP11.76□□□□□ -0.53
CD9-210ENST00000543916 GALNT14Q96FL9 552 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 FYTTD1Q96QD9 318 aaKnown RBP11.76□□□□□ -0.53
CD9-210ENST00000543916 SPIN2AQ99865 258 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 SPIN2BQ9BPZ2 258 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 ZFP57Q9NU63 452 aa11.76□□□□□ -0.53
CD9-210ENST00000543916 A0A0G2JRQ6 117 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 SNAPC5O75971 98 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 CDS2O95674 445 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 RAB9AP51151 201 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 AKR1C2P52895 323 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 DHODHQ02127 395 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 TMEM187Q14656 261 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 TMEM65Q6PI78 240 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 KLHL30-AS1Q8NEE0 82 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 TMEM68Q96MH6 324 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 MS4A10Q96PG2 267 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 COMMD5Q9GZQ3 224 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 TBC1D24Q9ULP9 559 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 FLVCR2Q9UPI3 526 aa11.75□□□□□ -0.53
CD9-210ENST00000543916 TEX50A0A1B0GTY4 177 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 C15orf61A6NNL5 157 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 NUDT19A8MXV4 375 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 UPK1BO75841 260 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 AREGP15514 252 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 CDX1P47902 265 aaPredicted RBP11.74□□□□□ -0.53
CD9-210ENST00000543916 IFITM3Q01628 133 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 TMEM128Q5BJH2 165 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 TMEM268Q5VZI3 342 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 C19orf35Q6ZS72 473 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 C8orf86Q6ZUL3 223 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 SELENOHQ8IZQ5 122 aaKnown RBP11.74□□□□□ -0.53
CD9-210ENST00000543916 CENPSQ8N2Z9 138 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 ZNF491Q8N8L2 437 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 RBPMSQ93062 196 aaKnown RBP11.74□□□□□ -0.53
CD9-210ENST00000543916 TSC22D3Q99576 134 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 GNB4Q9HAV0 340 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 TMEM14BQ9NUH8 114 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 COA4Q9NYJ1 87 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 KCNIP3Q9Y2W7 256 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 OR51B2Q9Y5P1 312 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 TRRAPQ9Y4A5 3859 aa11.74□□□□□ -0.53
CD9-210ENST00000543916 IGLC7A0M8Q6 106 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 H3BUA1 57 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 ATG12O94817 140 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 TRGV3P03979 118 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 TPPP2P59282 170 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 DEFA5Q01523 94 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 PPP1R1AQ13522 171 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 ETV3LQ6ZN32 361 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 SLC25A42Q86VD7 318 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 ZNF695Q8IW36 515 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 TTC9CQ8N5M4 171 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 OR4F17Q8NGA8 305 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 OR10W1Q8NGF6 305 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 UBE2E2Q96LR5 201 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 TMEM56Q96MV1 263 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 OR4F4Q96R69 305 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 QTRT1Q9BXR0 403 aaKnown RBP11.73□□□□□ -0.53
CD9-210ENST00000543916 ZNF355PQ9NSJ1 428 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 PRNDQ9UKY0 176 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 TMEM56-RWDD3S4R434 201 aa11.73□□□□□ -0.53
CD9-210ENST00000543916 A0A0B4J293 547 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 RBMXL2O75526 392 aaKnown RBP11.72□□□□□ -0.53
CD9-210ENST00000543916 PRH1P02810 166 aa11.72□□□□□ -0.53
CD9-210ENST00000543916 REG1AP05451 166 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms