RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 IGHV3OR16-12A0A075B7B8 117 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 TRAV25A0A0B4J276 109 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 KBTBD11O94819 623 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 P01737 135 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 DSCR9P59020 149 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 FOXF2Q12947 444 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 UNC119Q13432 240 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 C20orf204Q6ZNR8 217 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 SLC35E3Q7Z769 313 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 C11orf42Q8N5U0 333 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 OR4B1Q8NGF8 309 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 PHYHIPLQ96FC7 376 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 FAM103A1Q9BTL3 118 aaKnown RBP5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 DOCK7Q96N67 2140 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 CACNA1AO00555 2505 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 NOTCH3Q9UM47 2321 aa5.84□□□□□ -1.47
SRGAP1-206ENST00000543397 TRGV3P03979 118 aa5.84□□□□□ -1.48
SRGAP1-206ENST00000543397 RANP62826 216 aaKnown RBP5.84□□□□□ -1.48
SRGAP1-206ENST00000543397 HIST1H3AP68431 136 aa5.84□□□□□ -1.48
SRGAP1-206ENST00000543397 FAM71F2Q6NXP2 309 aa5.84□□□□□ -1.48
SRGAP1-206ENST00000543397 TEX261Q6UWH6 196 aa5.84□□□□□ -1.48
SRGAP1-206ENST00000543397 UNQ9370/PRO34162Q6UXP9 181 aa5.84□□□□□ -1.48
SRGAP1-206ENST00000543397 PAXXQ9BUH6 204 aa5.84□□□□□ -1.48
SRGAP1-206ENST00000543397 TOLLIPQ9H0E2 274 aa5.84□□□□□ -1.48
SRGAP1-206ENST00000543397 RBM38Q9H0Z9 239 aaKnown RBP5.84□□□□□ -1.48
SRGAP1-206ENST00000543397 YTHDF2Q9Y5A9 579 aaKnown RBP5.84□□□□□ -1.48
SRGAP1-206ENST00000543397 PGLYRP1O75594 196 aaPredicted RBP5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 SFTA3P0C7M3 94 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 BPIFA4PQ86YQ2 179 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 ZIC4Q8N9L1 334 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 ZNF738Q8NE65 137 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 PRSS3P2Q8NHM4 247 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 RGP1Q92546 391 aaPredicted RBP5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 SLC35B3Q9H1N7 401 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 MMP26Q9NRE1 261 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 CDRT15L2A8MXV6 281 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 CXorf1O96002 111 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 FAM90A1Q86YD7 464 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 ZCCHC24Q8N2G6 241 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 ZNF383Q8NA42 475 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 PCNX2A6NKB5 2137 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 HLA-DQB1P01920 261 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM249Q2WGJ8 235 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 A0A0G2JLM5 398 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 CTXND1A0A1B0GTU2 59 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 CLDN34H7C241 214 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 PIN1P1O15428 100 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 CFDP00746 253 aaPredicted RBP5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 RPL24P83731 157 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 OR9G4Q8NGQ1 327 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 LYPD6BQ8NI32 183 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 SSC4DQ8WTU2 575 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 GTF3AQ92664 365 aaKnown RBP5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 CUL9Q8IWT3 2517 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 IGKV1D-33P01593 117 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 IGKV1-33P01594 117 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 VSIG10L2P0DP72 767 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 LINC00114Q6XXX2 140 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 SOSTQ9BQB4 213 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 ANAPC13Q9BS18 74 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 RBKSQ9H477 322 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 TUBA4BQ9H853 241 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 LINC00312Q9Y6C7 94 aa5.83□□□□□ -1.48
SRGAP1-206ENST00000543397 IGHV1-18A0A0C4DH31 117 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 TMEM14DPA8MWL7 114 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 C12orf77C9JDV5 145 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 USP17L23D6RBM5 183 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 NPPCP23582 126 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 RAB9AP51151 201 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 MRPL13Q9BYD1 178 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 PRO1933Q9H354 126 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 PXMP4Q9Y6I8 212 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 HEATR5BQ9P2D3 2071 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 KBTBD11-OT1A0A1B0GTJ5 212 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 LYNX1G3V0Z9 82 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 MGPP08493 103 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 LYNX1P0DP58 116 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 HIST1H1BP16401 226 aaKnown RBP5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 CA7P43166 264 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 PKIAP61925 76 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 GLRX5Q86SX6 157 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 MDS2Q8NDY4 140 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 OR1N2Q8NGR9 330 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 GPR132Q9UNW8 380 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 TCF19Q9Y242 345 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 PIEZO1Q92508 2521 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 KIF26BQ2KJY2 2108 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 MGAMO43451 1857 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 IGKV3D-15A0A087WSY6 115 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 H0YL77 283 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 SCO1O75880 301 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 REG1AP05451 166 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 KLK2P20151 261 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 FCGR2BP31994 310 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 EFNA4P52798 201 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 Q0VFX4 171 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 SPANXN1Q5VSR9 72 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 DMRTC2Q8IXT2 367 aaPredicted RBP5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 DRAM1Q8N682 238 aa5.82□□□□□ -1.48
SRGAP1-206ENST00000543397 OSR1Q8TAX0 266 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms