RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 THAP7Q9BT49 309 aaPredicted RBP11.78□□□□□ -0.52
CSF1R-209ENST00000543093 FXYD6Q9H0Q3 95 aa11.78□□□□□ -0.52
CSF1R-209ENST00000543093 BET1LQ9NYM9 111 aa11.78□□□□□ -0.52
CSF1R-209ENST00000543093 DPPA5A6NC42 116 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 IZUMO1RA6ND01 250 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 RLN1P04808 185 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 CSN3P07498 182 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 NQO2P16083 231 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 GNRHRP30968 328 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 ALDH3B2P48448 385 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 RPL8P62917 257 aaKnown RBP11.77□□□□□ -0.53
CSF1R-209ENST00000543093 RHOGP84095 191 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 TATDN3Q17R31 274 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 RPEL1Q2QD12 228 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 CMTM1Q8IZ96 169 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 TTC9CQ8N5M4 171 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 OR6F1Q8NGZ6 308 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 CD300LFQ8TDQ1 290 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 FYTTD1Q96QD9 318 aaKnown RBP11.77□□□□□ -0.53
CSF1R-209ENST00000543093 RETNQ9HD89 108 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 HRASLSQ9HDD0 168 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 COMMD9Q9P000 198 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 ZNF257Q9Y2Q1 563 aa11.77□□□□□ -0.53
CSF1R-209ENST00000543093 HMX3A6NHT5 357 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 TEX22C9J3V5 150 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 S1PR2O95136 353 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 PRH1P02810 166 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 ZNF735P0CB33 412 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 HLA-GP17693 338 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 TSPAN5P62079 268 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 EXOSC2Q13868 293 aaKnown RBP11.76□□□□□ -0.53
CSF1R-209ENST00000543093 Q8N402 240 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 DMBX1Q8NFW5 382 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 PLEKHA2Q9HB19 425 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 AKIP1Q9NQ31 210 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 EXTL2Q9UBQ6 330 aa11.76□□□□□ -0.53
CSF1R-209ENST00000543093 NPIPB5A8MRT5 1133 aa11.75□□□□□ -0.53
CSF1R-209ENST00000543093 GPR31O00270 319 aa11.75□□□□□ -0.53
CSF1R-209ENST00000543093 RBMXL2O75526 392 aaKnown RBP11.75□□□□□ -0.53
CSF1R-209ENST00000543093 ERVK-16P61578 105 aa11.75□□□□□ -0.53
CSF1R-209ENST00000543093 ZNF45Q02386 682 aa11.75□□□□□ -0.53
CSF1R-209ENST00000543093 POU2AF1Q16633 256 aa11.75□□□□□ -0.53
CSF1R-209ENST00000543093 RNASE12Q5GAN4 147 aaKnown RBP11.75□□□□□ -0.53
CSF1R-209ENST00000543093 LYSMD2Q8IV50 215 aa11.75□□□□□ -0.53
CSF1R-209ENST00000543093 NECAP1Q8NC96 275 aa11.75□□□□□ -0.53
CSF1R-209ENST00000543093 TMEM140Q9NV12 185 aa11.75□□□□□ -0.53
CSF1R-209ENST00000543093 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
CSF1R-209ENST00000543093 BIRC6Q9NR09 4857 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 TRBV9A0A0B4J1U6 114 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 PGLYRP1O75594 196 aaPredicted RBP11.74□□□□□ -0.53
CSF1R-209ENST00000543093 DHFRP00374 187 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 IL6RP08887 468 aaPredicted RBP11.74□□□□□ -0.53
CSF1R-209ENST00000543093 F2RP25116 425 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 S100GP29377 79 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 ATP5G2Q06055 141 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 LPCAT3Q6P1A2 487 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 CLVS1Q8IUQ0 354 aaPredicted RBP11.74□□□□□ -0.53
CSF1R-209ENST00000543093 RAB2BQ8WUD1 216 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 FAM110AQ9BQ89 295 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 PLEKHA3Q9HB20 300 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 SLC2A9Q9NRM0 540 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 PEMTQ9UBM1 199 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 CEPT1Q9Y6K0 416 aa11.74□□□□□ -0.53
CSF1R-209ENST00000543093 A0A1B0GW64 132 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 MARCH11A6NNE9 402 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 E7EUB6 86 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 OR2J3O76001 311 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 JTBO76095 146 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 FGF2P09038 288 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 MYOD1P15172 320 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 AREGP15514 252 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 PSMB6P28072 239 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 MECP2P51608 486 aaKnown RBP11.73□□□□□ -0.53
CSF1R-209ENST00000543093 CD81P60033 236 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 SPCS2Q15005 226 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 C15orf32Q32M92 178 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 FAM209BQ5JX69 171 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 C15orf40Q8WUR7 153 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 COMMD5Q9GZQ3 224 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 HIPK2Q9H2X6 1198 aa11.73□□□□□ -0.53
CSF1R-209ENST00000543093 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.72□□□□□ -0.53
CSF1R-209ENST00000543093 UPK2O00526 184 aa11.72□□□□□ -0.53
CSF1R-209ENST00000543093 RGS5O15539 181 aa11.72□□□□□ -0.53
CSF1R-209ENST00000543093 NOL3O60936 208 aaKnown RBP11.72□□□□□ -0.53
CSF1R-209ENST00000543093 TPPPO94811 219 aa11.72□□□□□ -0.53
CSF1R-209ENST00000543093 CRYGCP07315 174 aa11.72□□□□□ -0.53
CSF1R-209ENST00000543093 PHLDA2Q53GA4 152 aa11.72□□□□□ -0.53
CSF1R-209ENST00000543093 LINC00322Q6ZN03 302 aaPredicted RBP11.72□□□□□ -0.53
CSF1R-209ENST00000543093 C19orf35Q6ZS72 473 aa11.72□□□□□ -0.53
CSF1R-209ENST00000543093 SLC38A6Q8IZM9 456 aa11.72□□□□□ -0.53
CSF1R-209ENST00000543093 OR2K2Q8NGT1 345 aa11.72□□□□□ -0.53
CSF1R-209ENST00000543093 DGCR14Q96DF8 476 aaKnown RBP11.72□□□□□ -0.53
CSF1R-209ENST00000543093 BCL7BQ9BQE9 202 aa11.72□□□□□ -0.53
CSF1R-209ENST00000543093 NEURL2Q9BR09 285 aa11.72□□□□□ -0.53
CSF1R-209ENST00000543093 TRAV3A0A0B4J244 114 aa11.71□□□□□ -0.53
CSF1R-209ENST00000543093 M0QYG6 137 aa11.71□□□□□ -0.53
CSF1R-209ENST00000543093 BMPR1BO00238 502 aa11.71□□□□□ -0.53
CSF1R-209ENST00000543093 REG1AP05451 166 aa11.71□□□□□ -0.53
CSF1R-209ENST00000543093 DEFA4P12838 97 aa11.71□□□□□ -0.53
CSF1R-209ENST00000543093 RPA2P15927 270 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms