RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 PPP1R32Q7Z5V6 425 aa11.11□□□□□ -0.63
TNC-212ENST00000542877 MOSP00540 346 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 CGAP01215 116 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 TFF3Q07654 80 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 NR2C2APQ86WQ0 139 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 EEF1AKMT3Q96AZ1 226 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 TBL2Q9Y4P3 447 aaKnown RBP11.1□□□□□ -0.63
TNC-212ENST00000542877 SPTBP11277 2137 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 TRBV20OR9-2A0A075B6H5 130 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 MTURNQ8N3F0 131 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 COL11A1P12107 1806 aaPredicted RBP11.1□□□□□ -0.63
TNC-212ENST00000542877 OR11H12B2RN74 326 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 TM4SF5O14894 197 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 GLRXP35754 106 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
TNC-212ENST00000542877 ZNF525Q8N782 197 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 OR11H1Q8NG94 326 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 OR11H2Q8NH07 326 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 IGHV1-69-2A0A0G2JMI3 117 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 TIAF1O95411 115 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 PSMG4Q5JS54 123 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 ZNRF1Q8ND25 227 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 LOC105371242A0A075B767 164 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 LRTM2Q8N967 370 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 RNF126Q9BV68 326 aa11.1□□□□□ -0.63
TNC-212ENST00000542877 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
TNC-212ENST00000542877 C17orf98A8MV24 154 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 SLC17A3O00476 420 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 PEX7O00628 323 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 FOXA3P55318 350 aaPredicted RBP11.09□□□□□ -0.63
TNC-212ENST00000542877 PEAR1Q5VY43 1037 aaPredicted RBP11.09□□□□□ -0.63
TNC-212ENST00000542877 AICDAQ9GZX7 198 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 FOXJ2Q9P0K8 574 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 IGFBP2P18065 325 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 KCNS1Q96KK3 526 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 REPIN1Q9BWE0 567 aaKnown RBP11.09□□□□□ -0.63
TNC-212ENST00000542877 ZNF703Q9H7S9 590 aaPredicted RBP11.09□□□□□ -0.63
TNC-212ENST00000542877 TMEM74BQ9NUR3 256 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 COL11A2P13942 1736 aaPredicted RBP11.09□□□□□ -0.63
TNC-212ENST00000542877 A0A1B0GW15 77 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 SCO2A0A1W2PP80 73 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 PCP4P48539 62 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 ICAM4Q14773 271 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 ZNF600Q6ZNG1 722 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 RAX2Q96IS3 184 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 C18orf12Q96KH6 178 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 KLK15Q9H2R5 256 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 POLR2AP24928 1970 aaKnown RBP11.09□□□□□ -0.63
TNC-212ENST00000542877 TGFBR3LH3BV60 316 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 PNKDQ8N490 385 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
TNC-212ENST00000542877 RBBP6Q7Z6E9 1792 aaKnown RBP11.08□□□□□ -0.63
TNC-212ENST00000542877 F8VVB4 439 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 F8VWA3 439 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 RFPL3SP0C7P2 107 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 ARL6IP6Q8N6S5 226 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 FAM131CQ96AQ9 280 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 ELOVL5Q9NYP7 299 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 B9A039 149 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 PROB1E7EW31 1015 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 ACSF3Q4G176 576 aaPredicted RBP11.08□□□□□ -0.64
TNC-212ENST00000542877 TTC32Q5I0X7 151 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 TIMM23BQ5SRD1 257 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 CACNG8Q8WXS5 425 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 WNT10AQ9GZT5 417 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 MPZP25189 248 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 LY6G6FQ5SQ64 297 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 FMC1Q96HJ9 113 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 ATP5G3P48201 142 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 FADS6Q8N9I5 356 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 IMMP2LQ96T52 175 aa11.08□□□□□ -0.64
TNC-212ENST00000542877 MRPS16Q9Y3D3 137 aaKnown RBP11.08□□□□□ -0.64
TNC-212ENST00000542877 A0A1B0GUT8 65 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 FOXI3A8MTJ6 420 aaPredicted RBP11.07□□□□□ -0.64
TNC-212ENST00000542877 IGKV3D-15A0A087WSY6 115 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 IGKV3-15P01624 115 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 Q6AWC8 147 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 NEUROG1Q92886 237 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 FGF16O43320 207 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 PPP1R17O96001 155 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 RPL23P62829 140 aaKnown RBP11.07□□□□□ -0.64
TNC-212ENST00000542877 FAM90A1Q86YD7 464 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 TEX29Q8N6K0 151 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 C1orf162Q8NEQ5 155 aaPredicted RBP11.07□□□□□ -0.64
TNC-212ENST00000542877 RPP21Q9H633 154 aaKnown RBP11.07□□□□□ -0.64
TNC-212ENST00000542877 LRRC37AA6NMS7 1700 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 IZUMO1RA6ND01 250 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 OR13A1Q8NGR1 328 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 MOB4Q9Y3A3 225 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 TRBV6-7A0A0A0MS04 114 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 J3QRE1 110 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 ATP5LO75964 103 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 APOHP02749 345 aaPredicted RBP11.07□□□□□ -0.64
TNC-212ENST00000542877 FAM159AQ6UWV7 190 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 TTC9CQ8N5M4 171 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 TEX45Q8NA69 505 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 TMEM160Q9NX00 188 aa11.07□□□□□ -0.64
TNC-212ENST00000542877 ANKRD36A6QL64 1941 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms