RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 PAX6P26367 422 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 HNF4GQ14541 408 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 SOHLH1Q5JUK2 328 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 DTX2Q86UW9 622 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 CYB561D1Q8N8Q1 229 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 SLC24A4Q8NFF2 622 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 GNG13Q9P2W3 67 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 HIVEP3Q5T1R4 2406 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 SMG1Q96Q15 3661 aaKnown RBP11.49□□□□□ -0.57
LDB3-207ENST00000542786 CTXND1A0A1B0GTU2 59 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 C7orf77A4D0Y5 90 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 SEC14L6B5MCN3 397 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 YIF1AO95070 293 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 CA2P00918 260 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 IGLV1-47P01700 117 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 MBP02144 154 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 RBP4P02753 201 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 ATF4P18848 351 aaPredicted RBP11.49□□□□□ -0.57
LDB3-207ENST00000542786 NPY1RP25929 384 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 ARSJQ5FYB0 599 aaPredicted RBP11.49□□□□□ -0.57
LDB3-207ENST00000542786 AVPI1Q5T686 147 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 PDPNQ86YL7 162 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 OR10X1Q8NGY0 326 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 MGST2Q99735 147 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 PCGF1Q9BSM1 259 aa11.49□□□□□ -0.57
LDB3-207ENST00000542786 COL6A6A6NMZ7 2263 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 COLCA2A8K830 154 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 MPDU1O75352 247 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 LY6HO94772 140 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 FAM90A2PQ658T7 463 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 LY6G5BQ8NDX9 201 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 OR10G9Q8NGN4 311 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 OR10G7Q8NGN6 311 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 TMEM167AQ8TBQ9 72 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 HARBI1Q96MB7 349 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 SLC25A22Q9H936 323 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 TNCP24821 2201 aa11.48□□□□□ -0.57
LDB3-207ENST00000542786 MALRD1Q5VYJ5 2156 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 FNDC10F2Z333 226 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 INS-IGF2F8WCM5 200 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 AKR1C3P42330 323 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 RAB11AP62491 216 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 RHEBQ15382 184 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 MRGPRG-AS1Q2M3A8 158 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 WDR25Q64LD2 544 aaPredicted RBP11.47□□□□□ -0.57
LDB3-207ENST00000542786 OR5B3Q8NH48 314 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 ITLN2Q8WWU7 325 aaPredicted RBP11.47□□□□□ -0.57
LDB3-207ENST00000542786 TNFRSF14Q92956 283 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 LHX4Q969G2 390 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 GGTLC1Q9BX51 225 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 RAB1BQ9H0U4 201 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 SMCO4Q9NRQ5 59 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 WASHC3Q9Y3C0 194 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 PKD1L2Q7Z442 2459 aa11.47□□□□□ -0.57
LDB3-207ENST00000542786 HRNRQ86YZ3 2850 aaPredicted RBP11.47□□□□□ -0.57
LDB3-207ENST00000542786 IGHV2-26A0A0B4J1V2 119 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 CGB1A6NKQ9 187 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 C17orf112F2Z3M2 114 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 OPRK1P41145 380 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 UQCRFS1P47985 274 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 DLX1P56177 255 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 C4orf17Q53FE4 359 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 ZNF709Q8N972 641 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 RAB24Q969Q5 203 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 FLYWCH2Q96CP2 140 aaKnown RBP11.46□□□□□ -0.57
LDB3-207ENST00000542786 UNKLQ9H9P5 680 aaKnown RBP11.46□□□□□ -0.57
LDB3-207ENST00000542786 NDUFA4L2Q9NRX3 87 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 SLC39A9Q9NUM3 307 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 FKBP11Q9NYL4 201 aa11.46□□□□□ -0.57
LDB3-207ENST00000542786 ZFP92A6NM28 416 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 C22orf46C9J442 243 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 H3BQ15 152 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 H7C2Y5 167 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 SOX15O60248 233 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 IFNA4P05014 189 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 SNRNP70P08621 437 aaKnown RBP11.46□□□□□ -0.58
LDB3-207ENST00000542786 DEFA4P12838 97 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 TMEM249Q2WGJ8 235 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 HLA-DRB5Q30154 266 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 GCSAMLQ5JQS6 135 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 OR4C13Q8NGP0 309 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 OR4A5Q8NH83 315 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 NEIL1Q96FI4 390 aaPredicted RBP11.46□□□□□ -0.58
LDB3-207ENST00000542786 RITA1Q96K30 269 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 C20orf24Q9BUV8 137 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 ACTR3CQ9C0K3 210 aaPredicted RBP11.46□□□□□ -0.58
LDB3-207ENST00000542786 TUBA4BQ9H853 241 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 PLEKHA3Q9HB20 300 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 VAX2Q9UIW0 290 aa11.46□□□□□ -0.58
LDB3-207ENST00000542786 TPRP12270 2363 aaKnown RBP11.45□□□□□ -0.58
LDB3-207ENST00000542786 RNASE2P10153 161 aaKnown RBP11.45□□□□□ -0.58
LDB3-207ENST00000542786 ATP5IP56385 69 aaPredicted RBP11.45□□□□□ -0.58
LDB3-207ENST00000542786 C2orf83Q53S99 150 aa11.45□□□□□ -0.58
LDB3-207ENST00000542786 FAM122CQ6P4D5 195 aa11.45□□□□□ -0.58
LDB3-207ENST00000542786 TGIF2LXQ8IUE1 241 aa11.45□□□□□ -0.58
LDB3-207ENST00000542786 NEU4Q8WWR8 484 aaPredicted RBP11.45□□□□□ -0.58
LDB3-207ENST00000542786 YPEL4Q96NS1 127 aa11.45□□□□□ -0.58
LDB3-207ENST00000542786 TMPRSS5Q9H3S3 457 aa11.45□□□□□ -0.58
LDB3-207ENST00000542786 ENY2Q9NPA8 101 aa11.45□□□□□ -0.58
LDB3-207ENST00000542786 RPS10P5Q9NQ39 176 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms