RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 KIF15Q9NS87 1388 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 NOTCH1P46531 2555 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 TMEM213A2RRL7 107 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 GGT3PA6NGU5 568 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 TMEM212A6NML5 194 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 F5H768 121 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 SDCBPO00560 298 aaPredicted RBP0.47□□□□□ -2.33
KNTC1-213ENST00000542727 LEPROTO15243 131 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 REG1AP05451 166 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 PRB4P10163 310 aaPredicted RBP0.47□□□□□ -2.33
KNTC1-213ENST00000542727 HLA-DMBP28068 263 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 S100A7P31151 101 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 CSN1S1P47710 185 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 CDC34P49427 236 aaPredicted RBP0.47□□□□□ -2.33
KNTC1-213ENST00000542727 DEFB115Q30KQ5 88 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 C5orf46Q6UWT4 87 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 HIST2H3AQ71DI3 136 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 DCXRQ7Z4W1 244 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 RPP25LQ8N5L8 163 aaKnown RBP0.47□□□□□ -2.33
KNTC1-213ENST00000542727 GPR84Q9NQS5 396 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 C15orf41Q9Y2V0 281 aa0.47□□□□□ -2.33
KNTC1-213ENST00000542727 TENM3Q9P273 2699 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 EIF4G1Q04637 1599 aaKnown RBP0.46□□□□□ -2.34
KNTC1-213ENST00000542727 TRAV14DV4A0A0A6YYC5 116 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 FABP12A6NFH5 140 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 IBA57-AS1B1ANH7 110 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 SLC22A1O15245 554 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 TYMSP04818 313 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 OCMP0CE72 109 aaPredicted RBP0.46□□□□□ -2.34
KNTC1-213ENST00000542727 CCL5P13501 91 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 RUNX1Q01196 453 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 CDK10Q15131 360 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 RSU1Q15404 277 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 NDUFA5Q16718 116 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 C10orf55Q5SWW7 151 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 COMMD7Q86VX2 200 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 C10orf67Q8IYJ2 551 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 TMEM251Q8N6I4 163 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 OR8B3Q8NGG8 313 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 SGMS2Q8NHU3 365 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 ANKRD7Q92527 254 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 KCTD7Q96MP8 289 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 FKBP14Q9NWM8 211 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 PAQR5Q9NXK6 330 aaPredicted RBP0.46□□□□□ -2.34
KNTC1-213ENST00000542727 PXMP4Q9Y6I8 212 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 MCM3APO60318 1980 aa0.46□□□□□ -2.34
KNTC1-213ENST00000542727 SNRNP200O75643 2136 aaKnown RBP0.46□□□□□ -2.34
KNTC1-213ENST00000542727 MUC5BQ9HC84 5762 aaPredicted RBP0.45□□□□□ -2.34
KNTC1-213ENST00000542727 MYH7BA7E2Y1 1941 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 TRBV10-2A0A0K0K1G8 114 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 C21orf140B9A014 251 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 LST1O00453 97 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 ITGB1BP1O14713 200 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 GEMIN2O14893 280 aaKnown RBP0.45□□□□□ -2.34
KNTC1-213ENST00000542727 COCHO43405 550 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 NPPAP01160 153 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 HLA-DRAP01903 254 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 SULT1A3P0DMM9 295 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 SULT1A4P0DMN0 295 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 CCL1P22362 96 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 PSMB6P28072 239 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 DDTP30046 118 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 EVX1P49640 407 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 BLVRAP53004 296 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 UBE2G2P60604 165 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 SKP1P63208 163 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 FABP9Q0Z7S8 132 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 TNFAIP8L3Q5GJ75 292 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 FAM78BQ5VT40 261 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 CST9Q5W186 159 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 TNFAIP8L2Q6P589 184 aaPredicted RBP0.45□□□□□ -2.34
KNTC1-213ENST00000542727 ZNF565Q8N9K5 539 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 C9orf163Q8N9P6 203 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 TMEM161BQ8NDZ6 487 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 OR7G1Q8NGA0 311 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 OR1M1Q8NGA1 313 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 SMIM19Q96E16 107 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 SERPINI1Q99574 410 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 OR8D2Q9GZM6 311 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 WDR54Q9H977 334 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 XAGE1AQ9HD64 81 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 SPANXB1Q9NS25 103 aaPredicted RBP0.45□□□□□ -2.34
KNTC1-213ENST00000542727 DKKL1Q9UK85 242 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 BAIAP2Q9UQB8 552 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 FUT9Q9Y231 359 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 POLR1DQ9Y2S0 133 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 SNURFQ9Y675 71 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 COL4A5P29400 1685 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 ZNF106Q9H2Y7 1883 aaKnown RBP0.45□□□□□ -2.34
KNTC1-213ENST00000542727 DOCK3Q8IZD9 2030 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 MYH10P35580 1976 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 SCN10AQ9Y5Y9 1956 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 TONSLQ96HA7 1378 aa0.45□□□□□ -2.34
KNTC1-213ENST00000542727 CHD3Q12873 2000 aaKnown RBP0.44□□□□□ -2.34
KNTC1-213ENST00000542727 IGHV1-69-2A0A0G2JMI3 117 aa0.44□□□□□ -2.34
KNTC1-213ENST00000542727 A0A1B0GW54 56 aa0.44□□□□□ -2.34
KNTC1-213ENST00000542727 OR4C45A6NMZ5 311 aa0.44□□□□□ -2.34
KNTC1-213ENST00000542727 GOLGA8MH3BSY2 632 aa0.44□□□□□ -2.34
KNTC1-213ENST00000542727 CALUO43852 315 aaPredicted RBP0.44□□□□□ -2.34
KNTC1-213ENST00000542727 IGHV3-7P01780 117 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms