RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 RFESDQ8TAC1 157 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 LRRC29Q8WV35 223 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 OR5B12Q96R08 314 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 TXNDC17Q9BRA2 123 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 PCGF1Q9BSM1 259 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 IFI27L2Q9H2X8 130 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 CHODLQ9H9P2 273 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 ZNF71Q9NQZ8 489 aaPredicted RBP4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 KCNIP2Q9NS61 270 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 UFSP2Q9NUQ7 469 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 DKK4Q9UBT3 224 aa4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 LSM4Q9Y4Z0 139 aaKnown RBP4.29□□□□□ -1.72
ATPAF1-212ENST00000542495 USF3Q68DE3 2245 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 FAM208BQ5VWN6 2430 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 CHD6Q8TD26 2715 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 TRGV8A0A0C4DH27 118 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 DEFB108AA8MXU0 73 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 MKRN2OSH3BPM6 223 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 RRHO14718 337 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 FCGR3BO75015 233 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 LHBP01229 141 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 STAG3L2P0CL84 134 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 STAG3L3P0CL85 134 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 GZMBP10144 247 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 DEFA4P12838 97 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 KIR2DS2P43631 304 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 ZNF134P52741 427 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 RPL15P61313 204 aaKnown RBP4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 FOXL1Q12952 345 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 MSMPQ1L6U9 139 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 GCSAMLQ5JQS6 135 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 PIP4P1Q86T03 277 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 SPACA3Q8IXA5 215 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 GCSAMQ8N6F7 178 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 NECAP1Q8NC96 275 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 FDCSPQ8NFU4 85 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 S100PBPQ96BU1 408 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 SARAFQ96BY9 339 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 STARD4Q96DR4 205 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 C14orf144Q96I85 54 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 BTF3L4Q96K17 158 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 MGST2Q99735 147 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 GGTLC1Q9BX51 225 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 DUSP13Q9UII6 198 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 FZR1Q9UM11 496 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 SLC25A15Q9Y619 301 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 CACNA1GO43497 2377 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 FREM2Q5SZK8 3169 aa4.28□□□□□ -1.72
ATPAF1-212ENST00000542495 FRYQ5TBA9 3013 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 TRAV3A0A0B4J244 114 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 TRAV38-1A0A0B4J264 116 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 TRAV17A0A0B4J275 112 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 A0A1W2PPQ1 181 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 XKRY2A2RUG3 117 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 AHRRA9YTQ3 701 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 C22orf46C9J442 243 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 FNDC10F2Z333 226 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 H3BS24 57 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 M0R1X1 148 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 NKX2-8O15522 239 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 RBMXL2O75526 392 aaKnown RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 GCGP01275 180 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 IGHV3-13P01766 116 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 IL6RP08887 468 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 RD3LP0DJH9 198 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 IL3RAP26951 378 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 ATP5G3P48201 142 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 EDDM3BP56851 147 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 DEFA6Q01524 100 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 EDDM3AQ14507 147 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 POU2AF1Q16633 256 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 C17orf58Q2M2W7 97 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 C3orf36Q3SXR2 165 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 RPL39P5Q59GN2 51 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 PRAMEF5Q5TYX0 476 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 KCNIP4Q6PIL6 250 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 SEM1Q6ZVN7 128 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 BHLHA15Q7RTS1 189 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 OR2Z1Q8NG97 314 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 OR4A16Q8NH70 328 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 FAM222BQ8WU58 562 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 ZCCHC14Q8WYQ9 949 aaKnown RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 TMEM140Q9NV12 185 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 GNG12Q9UBI6 72 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 RALYQ9UKM9 306 aaKnown RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 TCF19Q9Y242 345 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 FOXA2Q9Y261 457 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 ASPMQ8IZT6 3477 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 TRBV20OR9-2A0A075B6H5 130 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 SPAARA0A1B0GVQ0 90 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 A0A1W2PPV4 95 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 MBD3L4A6NDZ8 208 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 MBD3L3A6NE82 208 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 MBD3L5A6NJ08 208 aaPredicted RBP4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 C15orf61A6NNL5 157 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 SLC31A2O15432 143 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 CEACAM4O75871 244 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 NDUFB4O95168 129 aa4.27□□□□□ -1.73
ATPAF1-212ENST00000542495 CXorf1O96002 111 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms