RNA–Protein interactions for RNA: ENST00000542242.1

DDX11-219, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 795 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-219ENST00000542242 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
DDX11-219ENST00000542242 RBMXL1Q96E39 390 aaKnown RBP11.81□□□□□ -0.52
DDX11-219ENST00000542242 SIRPDQ9H106 197 aa11.81□□□□□ -0.52
DDX11-219ENST00000542242 SLC25A32Q9H2D1 315 aa11.81□□□□□ -0.52
DDX11-219ENST00000542242 PRNDQ9UKY0 176 aa11.81□□□□□ -0.52
DDX11-219ENST00000542242 FOXA2Q9Y261 457 aaPredicted RBP11.81□□□□□ -0.52
DDX11-219ENST00000542242 IGHV1-3A0A0C4DH29 117 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 IGHV4-61A0A0C4DH41 118 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 SRRM4A7MD48 611 aaKnown RBP11.8□□□□□ -0.52
DDX11-219ENST00000542242 LEUTXA8MZ59 168 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 LY6LH3BQJ8 138 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 LY6G6DO95868 133 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 METTL15P1P0C7V9 234 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 SAA1P0DJI8 122 aaPredicted RBP11.8□□□□□ -0.52
DDX11-219ENST00000542242 HTR1DP28221 377 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 TPTE2P1Q5T6R2 138 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 EIF5AL1Q6IS14 154 aaKnown RBP11.8□□□□□ -0.52
DDX11-219ENST00000542242 ZNF429Q86V71 674 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 PUSL1Q8N0Z8 303 aaKnown RBP11.8□□□□□ -0.52
DDX11-219ENST00000542242 TMEM217Q8N7C4 229 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 MAPK1IP1LQ8NDC0 245 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 OR5C1Q8NGR4 320 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 TMED6Q8WW62 240 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 MS4A7Q9GZW8 240 aaPredicted RBP11.8□□□□□ -0.52
DDX11-219ENST00000542242 ARV1Q9H2C2 271 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 UNKLQ9H9P5 680 aaKnown RBP11.8□□□□□ -0.52
DDX11-219ENST00000542242 MMP26Q9NRE1 261 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 BET1LQ9NYM9 111 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 DPM3Q9P2X0 92 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 TCF19Q9Y242 345 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 STRAPQ9Y3F4 350 aaKnown RBP11.8□□□□□ -0.52
DDX11-219ENST00000542242 INSIG2Q9Y5U4 225 aa11.8□□□□□ -0.52
DDX11-219ENST00000542242 WNK2Q9Y3S1 2297 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 IGHV3-72A0A0B4J1Y9 119 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 LINC00862A6NCI5 91 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 ODF3BA8MYP8 253 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 IL6RP08887 468 aaPredicted RBP11.79□□□□□ -0.52
DDX11-219ENST00000542242 NMBP08949 121 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 CEACAM3P40198 252 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 DVL1P1P54792 670 aaPredicted RBP11.79□□□□□ -0.52
DDX11-219ENST00000542242 ZNF266Q14584 549 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 PDLIM3Q53GG5 364 aaPredicted RBP11.79□□□□□ -0.52
DDX11-219ENST00000542242 TMEM14EPQ6UXP3 125 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 PDZD9Q8IXQ8 264 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 C1orf159Q96HA4 380 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 OR4C12Q96R67 309 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 ATP5SQ99766 215 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 TMEM14BQ9NUH8 114 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 POLR3KQ9Y2Y1 108 aaPredicted RBP11.79□□□□□ -0.52
DDX11-219ENST00000542242 FBN3Q75N90 2809 aa11.79□□□□□ -0.52
DDX11-219ENST00000542242 FAM157AC9JC47 383 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 DFFBO76075 338 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 KBTBD11O94819 623 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 TOX4O94842 621 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 FGF2P09038 288 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 HOXA1P49639 335 aaPredicted RBP11.78□□□□□ -0.52
DDX11-219ENST00000542242 HSPE1P61604 102 aaKnown RBP11.78□□□□□ -0.52
DDX11-219ENST00000542242 HBG1P69891 147 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 HBG2P69892 147 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 VMA21Q3ZAQ7 101 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 HAPLN4Q86UW8 402 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 STPG2Q8N412 459 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 OR4A5Q8NH83 315 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 VSTM2AQ8TAG5 236 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 TSNAXQ99598 290 aaKnown RBP11.78□□□□□ -0.52
DDX11-219ENST00000542242 GINS3Q9BRX5 216 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 HIPK2Q9H2X6 1198 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 ENY2Q9NPA8 101 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 FKBP11Q9NYL4 201 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 OR51B2Q9Y5P1 312 aa11.78□□□□□ -0.52
DDX11-219ENST00000542242 A0A1W2PPI3 338 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 A0A1W2PRD5 423 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 A0A1W2PRF3 423 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 A0A1W2PRM7 423 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 RNASEK-C17orf49H0YIS7 233 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 SMAD7O15105 426 aaKnown RBP11.77□□□□□ -0.53
DDX11-219ENST00000542242 FBXO24O75426 580 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 IGLV2-23P01705 113 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 USF1P22415 310 aaPredicted RBP11.77□□□□□ -0.53
DDX11-219ENST00000542242 VDAC2P45880 294 aaPredicted RBP11.77□□□□□ -0.53
DDX11-219ENST00000542242 LGALS7P47929 136 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 RPP30P78346 268 aaKnown RBP11.77□□□□□ -0.53
DDX11-219ENST00000542242 ARL16Q0P5N6 197 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 TMEM249Q2WGJ8 235 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 LILRB2Q8N423 598 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 HSD17B11Q8NBQ5 300 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 TMEM167AQ8TBQ9 72 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 LRRC20Q8TCA0 184 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 LPAR2Q9HBW0 351 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 HEYLQ9NQ87 328 aaPredicted RBP11.77□□□□□ -0.53
DDX11-219ENST00000542242 ZNF257Q9Y2Q1 563 aa11.77□□□□□ -0.53
DDX11-219ENST00000542242 SCAF4O95104 1147 aaKnown RBP11.76□□□□□ -0.53
DDX11-219ENST00000542242 IFNA5P01569 189 aa11.76□□□□□ -0.53
DDX11-219ENST00000542242 LGALS4P56470 323 aa11.76□□□□□ -0.53
DDX11-219ENST00000542242 SLC38A11Q08AI6 406 aa11.76□□□□□ -0.53
DDX11-219ENST00000542242 LDLRAD2Q5SZI1 272 aa11.76□□□□□ -0.53
DDX11-219ENST00000542242 MINOS1Q5TGZ0 78 aa11.76□□□□□ -0.53
DDX11-219ENST00000542242 OR8G2PQ6IF36 304 aa11.76□□□□□ -0.53
DDX11-219ENST00000542242 RNF141Q8WVD5 230 aa11.76□□□□□ -0.53
DDX11-219ENST00000542242 CXorf58Q96LI9 332 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms