RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 TRAPPC2LQ9UL33 140 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 AMMECR1Q9Y4X0 333 aaPredicted RBP2.25□□□□□ -2.05
LEMD3-204ENST00000542032 U3KQ87 197 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 GPATCH8Q9UKJ3 1502 aaKnown RBP2.25□□□□□ -2.05
LEMD3-204ENST00000542032 LTBP1Q14766 1721 aa2.25□□□□□ -2.05
LEMD3-204ENST00000542032 CACNA1SQ13698 1873 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 MYO5BQ9ULV0 1848 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 BICRAQ9NZM4 1560 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 IGSF9BQ9UPX0 1349 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 IGLV11-55A0A075B6I3 123 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 IGHV3-49A0A0A0MS15 119 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 IGHV7-4-1A0A0J9YVY3 117 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 IGHV5-10-1A0A0J9YXX1 117 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 A0A1B0GVX0 72 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 TMEM269A0A1B0GVZ9 245 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 PINLYPA6NC86 204 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 OR5H14A6NHG9 310 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 FAM25AB3EWG3 89 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 FAM25CB3EWG5 89 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 FAM25GB3EWG6 89 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 H0YJW9 148 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 CDS2O95674 445 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 IFNGP01579 166 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 IGLV1-47P01700 117 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF806P0C7X5 589 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 IGHV1-8P0DP01 117 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 NPY1RP25929 384 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 NUDT1P36639 197 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 OPRK1P41145 380 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 GABRA2P47869 451 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 EVX1P49640 407 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 CMC4P56277 68 aaPredicted RBP2.24□□□□□ -2.05
LEMD3-204ENST00000542032 RRAS2P62070 204 aaPredicted RBP2.24□□□□□ -2.05
LEMD3-204ENST00000542032 HIST1H1AQ02539 215 aaPredicted RBP2.24□□□□□ -2.05
LEMD3-204ENST00000542032 DHRS2Q13268 280 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 RNASE13Q5GAN3 156 aaKnown RBP2.24□□□□□ -2.05
LEMD3-204ENST00000542032 HRCT1Q6UXD1 115 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 CROCCP2Q86T23 111 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 WDR86Q86TI4 376 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 TMEM256Q8N2U0 113 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 OR2H1Q9GZK4 316 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 IMUPQ9GZP8 106 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 OR2D2Q9H210 308 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 TMEM38BQ9NVV0 291 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF230Q9UIE0 474 aaPredicted RBP2.24□□□□□ -2.05
LEMD3-204ENST00000542032 LAMTOR2Q9Y2Q5 125 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 MRPS16Q9Y3D3 137 aaKnown RBP2.24□□□□□ -2.05
LEMD3-204ENST00000542032 DENND4BO75064 1496 aaPredicted RBP2.24□□□□□ -2.05
LEMD3-204ENST00000542032 ARHGAP23Q9P227 1491 aa2.24□□□□□ -2.05
LEMD3-204ENST00000542032 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 CCNB3Q8WWL7 1395 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 LOXHD1Q8IVV2 1947 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF106Q9H2Y7 1883 aaKnown RBP2.23□□□□□ -2.05
LEMD3-204ENST00000542032 THSD7AQ9UPZ6 1657 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 MEIKINA0A087WXM9 373 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 A0A096LPI6 279 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 LINC00862A6NCI5 91 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 A8MWL6 223 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 C9JAW5 83 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 J3QRK9 145 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 TNFSF15O95150 251 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 IFNA10P01566 189 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 IGLV3-25P01717 112 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF25P17030 456 aaPredicted RBP2.23□□□□□ -2.05
LEMD3-204ENST00000542032 NUDT2P50583 147 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 RAB13P51153 203 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 KLF3P57682 345 aaPredicted RBP2.23□□□□□ -2.05
LEMD3-204ENST00000542032 FKBP1AP62942 108 aaKnown RBP2.23□□□□□ -2.05
LEMD3-204ENST00000542032 PSG9Q00887 426 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 BSPH1Q075Z2 132 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 ENDOGQ14249 297 aaKnown RBP2.23□□□□□ -2.05
LEMD3-204ENST00000542032 NEDD8Q15843 81 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 LYRM7Q5U5X0 104 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 MORN3Q6PF18 240 aaPredicted RBP2.23□□□□□ -2.05
LEMD3-204ENST00000542032 TIFABQ6ZNK6 161 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 SCXQ7RTU7 201 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 PACRGLQ8N7B6 248 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 C15orf56Q8N910 161 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 OR10G2Q8NGC3 310 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 OR8A1Q8NGG7 326 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 OR10D4PQ8NGN7 298 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 MRPL30Q8TCC3 161 aaKnown RBP2.23□□□□□ -2.05
LEMD3-204ENST00000542032 MAL2Q969L2 176 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 TOMM6Q96B49 74 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 ELSPBP1Q96BH3 223 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 ISOC1Q96CN7 298 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 RMI2Q96E14 147 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 C2orf50Q96LR7 162 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 CARD19Q96LW7 228 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 SPIN2AQ99865 258 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 SPIN2BQ9BPZ2 258 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 TCEAL7Q9BRU2 100 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 SMIM3Q9BZL3 60 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 RPP21Q9H633 154 aaKnown RBP2.23□□□□□ -2.05
LEMD3-204ENST00000542032 ZNF286AQ9HBT8 521 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 PCTPQ9UKL6 214 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 HIGD1AQ9Y241 93 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 MED31Q9Y3C7 131 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 SPEF2Q9C093 1822 aa2.23□□□□□ -2.05
LEMD3-204ENST00000542032 SCRIBQ14160 1630 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms