RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 WNK1Q9H4A3 2382 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 GATCO43716 136 aaKnown RBP13.49□□□□□ -0.25
VARS2-212ENST00000542001 LINC00869P0C866 280 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 OR5I1Q13606 314 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 MS4A5Q9H3V2 200 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 CA2P00918 260 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 PITPNC1Q9UKF7 332 aa13.49□□□□□ -0.25
VARS2-212ENST00000542001 KRTCAP3Q53RY4 240 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 NMSQ5H8A3 153 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 PIEZO1Q92508 2521 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 IGHV3OR16-8A0A075B7F1 116 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 TGOLN2O43493 480 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 CXorf1O96002 111 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 IGFBP2P18065 325 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 C1orf185Q5T7R7 199 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 ZNF497Q6ZNH5 498 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 RPRMLQ8N4K4 120 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 MYO9AB2RTY4 2548 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 LAMA1P25391 3075 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 CCDC168Q8NDH2 2452 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 CGAP01215 116 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 RND2P52198 227 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 MFAP2P55001 183 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 RPP25LQ8N5L8 163 aaKnown RBP13.48□□□□□ -0.25
VARS2-212ENST00000542001 KIR3DL3Q8N743 410 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 LINC01560Q8TB33 94 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 FKBP11Q9NYL4 201 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 TIMM9Q9Y5J7 89 aa13.48□□□□□ -0.25
VARS2-212ENST00000542001 IGKV3D-15A0A087WSY6 115 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 TRAV3A0A0B4J244 114 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 MOSP00540 346 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 AGAP20933 346 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 TPPP2P59282 170 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 SLC35E4Q6ICL7 350 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 TCF23Q7RTU1 214 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 OR5AU1Q8NGC0 362 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 VAMP8Q9BV40 100 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 C1QTNF9P0C862 333 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 HSPE1P61604 102 aaKnown RBP13.47□□□□□ -0.25
VARS2-212ENST00000542001 RPEL1Q2QD12 228 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 OR1L8Q8NGR8 309 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 FAM222BQ8WU58 562 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 NPIPB3Q92617 1050 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 CISD1Q9NZ45 108 aaKnown RBP13.47□□□□□ -0.25
VARS2-212ENST00000542001 WDFY4Q6ZS81 3184 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 SCO2A0A1W2PP80 73 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 CD3EP07766 207 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 OR9G9P0C7N8 305 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 CT45A10P0DMU9 189 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 IQCJQ1A5X6 159 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 STPG3Q8N7X2 389 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 PRNDQ9UKY0 176 aa13.47□□□□□ -0.25
VARS2-212ENST00000542001 CELSR3Q9NYQ7 3312 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 J3KRW8 73 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 CDX4O14627 284 aaPredicted RBP13.46□□□□□ -0.25
VARS2-212ENST00000542001 KBTBD11O94819 623 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 CD24P25063 80 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 PLA2G5P39877 138 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 CDX1P47902 265 aaPredicted RBP13.46□□□□□ -0.25
VARS2-212ENST00000542001 Q56UQ5 140 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 FAM87AP0C7U9 286 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 KIR2DL2P43627 348 aaPredicted RBP13.46□□□□□ -0.25
VARS2-212ENST00000542001 MMDQ15546 238 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 ZNF714Q96N38 554 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 ASCL3Q9NQ33 180 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 ZDHHC8Q9ULC8 765 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 TLN2Q9Y4G6 2542 aa13.46□□□□□ -0.25
VARS2-212ENST00000542001 VPS13AQ96RL7 3174 aa13.46□□□□□ -0.26
VARS2-212ENST00000542001 CEACAM18A8MTB9 384 aa13.46□□□□□ -0.26
VARS2-212ENST00000542001 ETV2O00321 342 aaPredicted RBP13.46□□□□□ -0.26
VARS2-212ENST00000542001 WISP2O76076 250 aa13.46□□□□□ -0.26
VARS2-212ENST00000542001 ADTRPQ96IZ2 230 aa13.46□□□□□ -0.26
VARS2-212ENST00000542001 TBX15Q96SF7 602 aa13.46□□□□□ -0.26
VARS2-212ENST00000542001 SMDT1Q9H4I9 107 aa13.46□□□□□ -0.26
VARS2-212ENST00000542001 CLEC3BP05452 202 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 PRR7Q8TB68 274 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 DERL1Q9BUN8 251 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 DYSFO75923 2080 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 LINC00473A8K010 186 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 MLNRO43193 412 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 ATOH7Q8N100 152 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 HSPB9Q9BQS6 159 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 SLC31A2O15432 143 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 CD33P20138 364 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 ARF6P62330 175 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 C10orf55Q5SWW7 151 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 PDPNQ86YL7 162 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 LRTM2Q8N967 370 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 ADAMTS9Q9P2N4 1935 aa13.45□□□□□ -0.26
VARS2-212ENST00000542001 IGHV1-18A0A0C4DH31 117 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 PDE6DO43924 150 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 USF1P22415 310 aaPredicted RBP13.44□□□□□ -0.26
VARS2-212ENST00000542001 SRSF4Q08170 494 aaKnown RBP13.44□□□□□ -0.26
VARS2-212ENST00000542001 C10orf113Q5VZT2 155 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 OR4A47Q6IF82 309 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 ANAPC16Q96DE5 110 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 ABHD17AQ96GS6 310 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 CFPP27918 469 aa13.44□□□□□ -0.26
VARS2-212ENST00000542001 RPL8P62917 257 aaKnown RBP13.44□□□□□ -0.26
VARS2-212ENST00000542001 SPSB4Q96A44 273 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms