RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 KCNIP1Q9NZI2 227 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 SLC31A2O15432 143 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 CHRNA7P36544 502 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 GNB1P62873 340 aa14.15□□□□□ -0.14
SPIDR-227ENST00000541342 ATP5G3P48201 142 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 TNFAIP6P98066 277 aaPredicted RBP14.14□□□□□ -0.15
SPIDR-227ENST00000541342 ZNF114Q8NC26 417 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 OR5T1Q8NG75 326 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 OR13A1Q8NGR1 328 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 IL19Q9UHD0 177 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 RAI1Q7Z5J4 1906 aaPredicted RBP14.14□□□□□ -0.15
SPIDR-227ENST00000541342 TRAV38-1A0A0B4J264 116 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 OOEPA6NGQ2 149 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 RAB29O14966 203 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 OR4A8P0C604 315 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 SRP14P37108 136 aaKnown RBP14.14□□□□□ -0.15
SPIDR-227ENST00000541342 FAM90A1Q86YD7 464 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 DCTN5Q9BTE1 182 aa14.14□□□□□ -0.15
SPIDR-227ENST00000541342 IL3RAP26951 378 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 RPL15P61313 204 aaKnown RBP14.13□□□□□ -0.15
SPIDR-227ENST00000541342 ST6GALNAC3Q8NDV1 305 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 IGHV3-43A0A0B4J1X8 118 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 IGHV3-43DP0DP04 118 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 CDC34P49427 236 aaPredicted RBP14.13□□□□□ -0.15
SPIDR-227ENST00000541342 SSTP61278 116 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 CATR1Q13166 79 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 H2BFWTQ7Z2G1 175 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 TMEM144Q7Z5S9 345 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 QTRT1Q9BXR0 403 aaKnown RBP14.13□□□□□ -0.15
SPIDR-227ENST00000541342 DYSFO75923 2080 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 ROS1P08922 2347 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 PGPEP1LA6NFU8 196 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 MARCH11A6NNE9 402 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 PAX5Q02548 391 aa14.13□□□□□ -0.15
SPIDR-227ENST00000541342 TRBV20OR9-2A0A075B6H5 130 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 A0A1B0GUS0 222 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 PROP1O75360 226 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 TAS2R60P59551 318 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 EDDM3AQ14507 147 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 ZNRF1Q8ND25 227 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 C2orf88Q9BSF0 95 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 PIEZO1Q92508 2521 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 DEFB108AA8MXU0 73 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 GCGP01275 180 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 OR9G9P0C7N8 305 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 SELLP14151 372 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 UBE2G2P60604 165 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 ZCCHC24Q8N2G6 241 aaKnown RBP14.12□□□□□ -0.15
SPIDR-227ENST00000541342 CIB3Q96Q77 187 aaPredicted RBP14.12□□□□□ -0.15
SPIDR-227ENST00000541342 ZNF705GA8MUZ8 300 aaPredicted RBP14.12□□□□□ -0.15
SPIDR-227ENST00000541342 ST8SIA5O15466 376 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 CASP6P55212 293 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 Q3ZCU0 254 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 FAM78BQ5VT40 261 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 ZNF709Q8N972 641 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 WDR83OSQ9Y284 106 aa14.12□□□□□ -0.15
SPIDR-227ENST00000541342 TMPRSS2O15393 492 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 COL8A2P25067 703 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 SSX8Q7RTT4 187 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 RFESDQ8TAC1 157 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 FAM222BQ8WU58 562 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 DCAF16Q9NXF7 216 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 RNF7Q9UBF6 113 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 CCL21O00585 134 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 RBFOX2O43251 390 aaKnown RBP eCLIP14.11□□□□□ -0.15
SPIDR-227ENST00000541342 NDUFB4O95168 129 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 GBGT1Q8N5D6 347 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 Q8TCH9 128 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 ZCCHC14Q8WYQ9 949 aaKnown RBP14.11□□□□□ -0.15
SPIDR-227ENST00000541342 NOL4LQ96MY1 436 aaPredicted RBP14.11□□□□□ -0.15
SPIDR-227ENST00000541342 NDUFAF3Q9BU61 184 aa14.11□□□□□ -0.15
SPIDR-227ENST00000541342 SHISA9B4DS77 424 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 C15orf65H3BRN8 121 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 RBMXL2O75526 392 aaKnown RBP14.1□□□□□ -0.15
SPIDR-227ENST00000541342 CCL8P80075 99 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 ACOT6Q3I5F7 207 aaPredicted RBP14.1□□□□□ -0.15
SPIDR-227ENST00000541342 DUX4L9Q6RFH8 374 aaPredicted RBP14.1□□□□□ -0.15
SPIDR-227ENST00000541342 NEUROG1Q92886 237 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 LURAP1Q96LR2 239 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 GRNP28799 593 aaKnown RBP14.1□□□□□ -0.15
SPIDR-227ENST00000541342 CD1BP29016 333 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 LCN2P80188 198 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 CDSNQ15517 529 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 NINJ1Q92982 152 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 PRORYQ9H606 182 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 PSG11Q9UQ72 335 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 FAM90A27PA6NNH2 459 aa14.1□□□□□ -0.15
SPIDR-227ENST00000541342 C17orf112F2Z3M2 114 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 NUPR1O60356 82 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 TNFSF4P23510 183 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 CNN1P51911 297 aaKnown RBP14.09□□□□□ -0.15
SPIDR-227ENST00000541342 EDDM3BP56851 147 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 LY6DQ14210 128 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 TMEM249Q2WGJ8 235 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 AARDQ4LEZ3 155 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 RAB1CQ92928 201 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 DSCAML1Q8TD84 2053 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 C17orf100A8MU93 164 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 PDE6DO43924 150 aa14.09□□□□□ -0.15
SPIDR-227ENST00000541342 PATZ1Q9HBE1 687 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms