RNA–Protein interactions for RNA: ENST00000541260.5

CCDC189-204, Transcript of coiled-coil domain containing 189, human

TSL 5 BASIC

Gene CCDC189, Length 1,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC189-204	ENST00000541260	SNAPC5	O75971	98 aa		13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	IGKV1-5	P01602	117 aa		13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	IGLV1-40	P01703	118 aa		13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	OR9G9	P0C7N8	305 aa		13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	CD28	P10747	220 aa		13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	SRPX	P78539	464 aa		13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	FOXE3	Q13461	319 aa		13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	ECSCR	Q19T08	205 aa		13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	TCTEX1D4	Q5JR98	221 aa		13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	UNQ5815/PRO19632	Q6UWF5	114 aa		13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	SELENOH	Q8IZQ5	122 aa	Known RBP	13.24	□□□□□ -0.29
CCDC189-204	ENST00000541260	RPL27A	P46776	148 aa	Known RBP	13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	AKR1C2	P52895	323 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	PPP1R1A	Q13522	171 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	C10orf55	Q5SWW7	151 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	ASPHD1	Q5U4P2	390 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	TMEM268	Q5VZI3	342 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	ZNF695	Q8IW36	515 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	FAM219A	Q8IW50	185 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	OR5M8	Q8NGP6	311 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	COMMD5	Q9GZQ3	224 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	C20orf85	Q9H1P6	137 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	FKBP11	Q9NYL4	201 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	PRND	Q9UKY0	176 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	FOXA2	Q9Y261	457 aa	Predicted RBP	13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	C15orf61	A6NNL5	157 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260		E7EUB6	86 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	SFT2D2	O95562	160 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	PSMB8	P28062	276 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	DEFA1	P59665	94 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	DEFA3	P59666	94 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	LGI3	Q8N145	548 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	C11orf44	Q8N8P7	122 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	LRTM2	Q8N967	370 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	LSM10	Q969L4	123 aa	Known RBP	13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	RRNAD1	Q96FB5	475 aa	Known RBP	13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260	TMEM14B	Q9NUH8	114 aa		13.23	□□□□□ -0.29
CCDC189-204	ENST00000541260		A0A0B4J2A0	478 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260		A0A1B0GW64	132 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260		A0A1W2PN81	502 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	TEX22	C9J3V5	150 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	SOX15	O60248	233 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	BRI3	O95415	125 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	OR4E1	P0C645	316 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	VAMP1	P23763	118 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	CHRNA7	P36544	502 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	MECP2	P51608	486 aa	Known RBP	13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	OR2B8P	P59922	312 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	THOC7	Q6I9Y2	204 aa	Known RBP	13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	ZNF429	Q86V71	674 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	DUSP18	Q8NEJ0	188 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	OR5B3	Q8NH48	314 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	PHB2	Q99623	299 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	CITED2	Q99967	270 aa	Predicted RBP	13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	SRSF8	Q9BRL6	282 aa	Known RBP	13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	SHPK	Q9UHJ6	478 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	NSG2	Q9Y328	171 aa		13.22	□□□□□ -0.29
CCDC189-204	ENST00000541260	TEX50	A0A1B0GTY4	177 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	C9orf170	A2RU37	121 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	CGB1	A6NKQ9	187 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	OPN1MW	P04001	364 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	OPN1MW2	P0DN77	364 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	OPN1MW3	P0DN78	364 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	ANXA7	P20073	488 aa	Known RBP	13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	CXorf66	Q5JRM2	361 aa	Predicted RBP	13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	SLC35G3	Q8N808	338 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	OR1L8	Q8NGR8	309 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	OR4A16	Q8NH70	328 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	QTRT1	Q9BXR0	403 aa	Known RBP	13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	ZFP57	Q9NU63	452 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	NUDT15	Q9NV35	164 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	ZNF257	Q9Y2Q1	563 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	OR51B2	Q9Y5P1	312 aa		13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.21	□□□□□ -0.29
CCDC189-204	ENST00000541260		A0A0B4J293	547 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	DUXB	A0A1W2PPF3	345 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	TCRBV4S1A1T	A0A5B7	111 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260		H3BUA1	57 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	HLA-A	P01891	365 aa	Known RBP	13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	MYOD1	P15172	320 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	DHRS2	Q13268	280 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	ANKRD55	Q3KP44	614 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	LYG2	Q86SG7	212 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	NDUFA11	Q86Y39	141 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	TTC9C	Q8N5M4	171 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	ENKUR	Q8TC29	256 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	MYOZ3	Q8TDC0	251 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	FYTTD1	Q96QD9	318 aa	Known RBP	13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	PALMD	Q9NP74	551 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	NDUFA4L2	Q9NRX3	87 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	PRR13	Q9NZ81	148 aa		13.2	□□□□□ -0.3
CCDC189-204	ENST00000541260	TRAV6	A0A075B6T7	132 aa		13.19	□□□□□ -0.3
CCDC189-204	ENST00000541260		A0A0G2JRQ6	117 aa		13.19	□□□□□ -0.3
CCDC189-204	ENST00000541260	HMX3	A6NHT5	357 aa		13.19	□□□□□ -0.3
CCDC189-204	ENST00000541260	DBX1	A6NMT0	343 aa		13.19	□□□□□ -0.3
CCDC189-204	ENST00000541260	H2AFB2	P0C5Z0	115 aa		13.19	□□□□□ -0.3
CCDC189-204	ENST00000541260	TRAPPC2	P0DI81	140 aa		13.19	□□□□□ -0.3
CCDC189-204	ENST00000541260	TRAPPC2B	P0DI82	140 aa		13.19	□□□□□ -0.3
CCDC189-204	ENST00000541260	RAB9A	P51151	201 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms