RNA–Protein interactions for RNA: ENST00000541017.5

PPFIA2-204, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 2 BASIC

Gene PPFIA2, Length 4,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-204ENST00000541017 Q56UQ5 140 aa6.89□□□□□ -1.31
PPFIA2-204ENST00000541017 FAM74A1Q5RGS3 127 aa6.89□□□□□ -1.31
PPFIA2-204ENST00000541017 Q8WTZ3 238 aa6.89□□□□□ -1.31
PPFIA2-204ENST00000541017 RBMXL1Q96E39 390 aaKnown RBP6.89□□□□□ -1.31
PPFIA2-204ENST00000541017 ATP5SQ99766 215 aa6.89□□□□□ -1.31
PPFIA2-204ENST00000541017 HSPB7Q9UBY9 170 aa6.89□□□□□ -1.31
PPFIA2-204ENST00000541017 VPREB3Q9UKI3 123 aa6.89□□□□□ -1.31
PPFIA2-204ENST00000541017 ARID1AO14497 2285 aa6.89□□□□□ -1.31
PPFIA2-204ENST00000541017 TMEM89A2RUT3 159 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 GNG7O60262 68 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 PITX3O75364 302 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 KLRD1Q13241 179 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 KHDC1LQ5JSQ8 128 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 DUX4L9Q6RFH8 374 aaPredicted RBP6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 IGFBPL1Q8WX77 278 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 SRSF12Q8WXF0 261 aaKnown RBP6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 AJUBAQ96IF1 538 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 USMG5Q96IX5 58 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 LYRM2Q9NU23 88 aaPredicted RBP6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 EPG5Q9HCE0 2579 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 CENPVL3A0A0U1RRI6 287 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 A0A1W2PPR1 153 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 POLR2GP62487 172 aaKnown RBP eCLIP6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 ATP5G2Q06055 141 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 SRSF4Q08170 494 aaKnown RBP6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 TMUB2Q71RG4 321 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 MISP3Q96FF7 219 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 WDR89Q96FK6 387 aaPredicted RBP6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 ATP6V0BQ99437 205 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 AGMATQ9BSE5 352 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 FBXL15Q9H469 300 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 RBKSQ9H477 322 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 SIGLEC9Q9Y336 463 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 DPPA3Q6W0C5 159 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 CENPVQ7Z7K6 275 aaPredicted RBP6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 KCNRGQ8N5I3 272 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 RNF141Q8WVD5 230 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 RBM14Q96PK6 669 aaKnown RBP6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 MAGT1Q9H0U3 335 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 ZNF462Q96JM2 2506 aa6.88□□□□□ -1.31
PPFIA2-204ENST00000541017 MALRD1Q5VYJ5 2156 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 A0A1W2PS18 150 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 RNASEK-C17orf49H0YIS7 233 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 SLC31A2O15432 143 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 ID3Q02535 119 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 ECSCRQ19T08 205 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 NPBQ8NG41 125 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 AQP10Q96PS8 301 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 GPR61Q9BZJ8 451 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 ACTR3CQ9C0K3 210 aaPredicted RBP6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 ZNF581Q9P0T4 197 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 FAM223BA6NKX1 122 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 SERF2P84101 59 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 LY6EQ16553 131 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 NMSQ5H8A3 153 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 TEPPQ6URK8 271 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 FAM223AQ8IWN6 122 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 IQCF2Q8IXL9 164 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 OR1P1Q8NH06 330 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 TXN2Q99757 166 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 CHD3Q12873 2000 aaKnown RBP6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 CACNA1DQ01668 2161 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 F6UZH7 168 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 TSPAN15O95858 294 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 ZFP36P26651 326 aaKnown RBP6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 BAP18Q8IXM2 172 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 LIME1Q9H400 295 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 IGHV3OR16-10A0A075B7F0 116 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 CD5P06127 495 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 FAM106AQ4KMX7 169 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 C2orf83Q53S99 150 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 C9orf139Q6ZV77 190 aa6.87□□□□□ -1.31
PPFIA2-204ENST00000541017 FGF7P21781 194 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 SRSF1Q07955 248 aaKnown RBP eCLIP6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 FAM120AOSQ5T036 256 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 PUSL1Q8N0Z8 303 aaKnown RBP6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 NRGNQ92686 78 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 TRAV41A0A0B4J266 112 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 DBX1A6NMT0 343 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 COX7A2P2O60397 106 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 PF4V1P10720 104 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 EWSR1Q01844 656 aaKnown RBP eCLIP6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 LGALSLQ3ZCW2 172 aaPredicted RBP6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 SPSB3Q6PJ21 355 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 TMEM252Q8N6L7 170 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 TMEM217Q8N7C4 229 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 Q8N7P7 452 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 SUN5Q8TC36 379 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 ELOVL1Q9BW60 279 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 ZNF430Q9H8G1 570 aaPredicted RBP6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 GNB4Q9HAV0 340 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 ZNRD1Q9P1U0 126 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 ARFGEF3Q5TH69 2177 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 CA2P00918 260 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 MEOX2P50222 304 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 RHOBP62745 196 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 RPL30P62888 115 aaKnown RBP6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 SUPT4H1P63272 117 aaKnown RBP6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 CLINT1Q14677 625 aa6.86□□□□□ -1.31
PPFIA2-204ENST00000541017 UHRF2Q96PU4 802 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms