RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 HINT2Q9BX68 163 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 MS4A7Q9GZW8 240 aaPredicted RBP9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 SVEP1Q4LDE5 3571 aa9.88□□□□□ -0.83
AP003559.1-201ENST00000540906 WNK2Q9Y3S1 2297 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 PRSS46E5RG02 174 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 SLC25A17O43808 307 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 COX6B1P14854 86 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 HOXA1P49639 335 aaPredicted RBP9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 LRRC75BQ2VPJ9 315 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 LILRB2Q8N423 598 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 OR10W1Q8NGF6 305 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 OR4C13Q8NGP0 309 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 OR2G3Q8NGZ4 309 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 LINC00052Q96N35 136 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 CIB3Q96Q77 187 aaPredicted RBP9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 TBX15Q96SF7 602 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 TSNAXQ99598 290 aaKnown RBP9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 VSIRQ9H7M9 311 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 HEYLQ9NQ87 328 aaPredicted RBP9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 HILPDAQ9Y5L2 63 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 DOPEY2Q9Y3R5 2298 aa9.87□□□□□ -0.83
AP003559.1-201ENST00000540906 hCG_1809904A0A1W2PP81 198 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 A0A1W2PPE2 198 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 A0A1W2PR64 198 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 A0A1W2PRV1 198 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 TIMM23O14925 209 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 DFFBO76075 338 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 CD24P25063 80 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 HSD17B13Q7Z5P4 300 aaPredicted RBP9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 KIR3DL3Q8N743 410 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 TMEM167AQ8TBQ9 72 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 FAM168AQ92567 244 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 RPEQ96AT9 228 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 HRH4Q9H3N8 390 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 ZNF430Q9H8G1 570 aaPredicted RBP9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 PRNDQ9UKY0 176 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 FBXO7Q9Y3I1 522 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 INSIG2Q9Y5U4 225 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 IFNA10P01566 189 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 CRYGBP07316 175 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 HBG1P69891 147 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 HBG2P69892 147 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 PRCDQ00LT1 54 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 AKR1C1Q04828 323 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 EIF5AL1Q6IS14 154 aaKnown RBP9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 CFHR4Q92496 578 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 SAT2Q96F10 170 aaPredicted RBP9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 PSMG3-AS1Q96PY0 264 aa9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 WDR61Q9GZS3 305 aaKnown RBP9.86□□□□□ -0.83
AP003559.1-201ENST00000540906 A0A1B0GV50 99 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 AGPAT2O15120 278 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 EIF3GO75821 320 aaKnown RBP eCLIP9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 CA2P00918 260 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 HTR1DP28221 377 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 LRRC20Q8TCA0 184 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 MARVELD3Q96A59 401 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 C1orf159Q96HA4 380 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 AJUBAQ96IF1 538 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 PIMREGQ9BSJ6 248 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 TMEM231Q9H6L2 316 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 UNKLQ9H9P5 680 aaKnown RBP9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 DPM3Q9P2X0 92 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 AMMECR1Q9Y4X0 333 aaPredicted RBP9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 KPTNQ9Y664 436 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 CSMD2Q7Z408 3487 aa9.85□□□□□ -0.83
AP003559.1-201ENST00000540906 VENTXO95231 258 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 IFNA5P01569 189 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 MDKP21741 143 aaPredicted RBP9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 MC5RP33032 325 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 RAB13P51153 203 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 RPL8P62917 257 aaKnown RBP9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 SSBP2P81877 361 aaPredicted RBP9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 PSG5Q15238 335 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 VWC2Q2TAL6 325 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 ETV3LQ6ZN32 361 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 C1orf122Q6ZSJ8 110 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 SSX7Q7RTT5 188 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 EIF4E3Q8N5X7 224 aaKnown RBP9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 OR10P1Q8NGE3 313 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 LYPD6BQ8NI32 183 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 FAM213BQ8TBF2 198 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 MARC2Q969Z3 335 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 TMEM147Q9BVK8 224 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 PARP11Q9NR21 331 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 NDUFA4L2Q9NRX3 87 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 ZNF257Q9Y2Q1 563 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 FAM96BQ9Y3D0 163 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 POLQO75417 2590 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 HECTD1Q9ULT8 2610 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 TOX4O94842 621 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 IGKV1D-33P01593 117 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 IGKV1-33P01594 117 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 OR8U8P0C7N1 319 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 CAMLGP49069 296 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 DVL1P1P54792 670 aaPredicted RBP9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 CCL20P78556 96 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 ZNF616Q08AN1 781 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 ZNF787Q6DD87 383 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 SLC25A24Q6NUK1 477 aa9.84□□□□□ -0.83
AP003559.1-201ENST00000540906 C19orf35Q6ZS72 473 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms