RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TEX50A0A1B0GTY4 177 aa19.73■□□□□ 0.75
TTC3-225ENST00000540756 C15orf62A8K5M9 175 aa19.73■□□□□ 0.75
TTC3-225ENST00000540756 PMS2P5A8MQ11 134 aa19.73■□□□□ 0.75
TTC3-225ENST00000540756 MRGPRG-AS1Q2M3A8 158 aa19.73■□□□□ 0.75
TTC3-225ENST00000540756 CIB3Q96Q77 187 aaPredicted RBP19.73■□□□□ 0.75
TTC3-225ENST00000540756 PRNDQ9UKY0 176 aa19.73■□□□□ 0.75
TTC3-225ENST00000540756 STRAPQ9Y3F4 350 aaKnown RBP19.73■□□□□ 0.75
TTC3-225ENST00000540756 HOXA1P49639 335 aaPredicted RBP19.73■□□□□ 0.75
TTC3-225ENST00000540756 TMEM170AQ8WVE7 144 aa19.73■□□□□ 0.75
TTC3-225ENST00000540756 CFHR4Q92496 578 aa19.73■□□□□ 0.75
TTC3-225ENST00000540756 AIFM2Q9BRQ8 373 aa19.73■□□□□ 0.75
TTC3-225ENST00000540756 HEYLQ9NQ87 328 aaPredicted RBP19.73■□□□□ 0.75
TTC3-225ENST00000540756 FAM157CP0CG43 387 aa19.72■□□□□ 0.75
TTC3-225ENST00000540756 C10orf55Q5SWW7 151 aa19.72■□□□□ 0.75
TTC3-225ENST00000540756 ATP5SQ99766 215 aa19.72■□□□□ 0.75
TTC3-225ENST00000540756 GINS3Q9BRX5 216 aa19.72■□□□□ 0.75
TTC3-225ENST00000540756 ZNF430Q9H8G1 570 aaPredicted RBP19.72■□□□□ 0.75
TTC3-225ENST00000540756 RRHO14718 337 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 PAX8Q06710 450 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 TMEM167AQ8TBQ9 72 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 AJUBAQ96IF1 538 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 SLC25A32Q9H2D1 315 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 NAV3Q8IVL0 2385 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 ZNF469Q96JG9 3925 aaPredicted RBP19.71■□□□□ 0.75
TTC3-225ENST00000540756 CEACAM3P40198 252 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 DSCR9P59020 149 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 RPL8P62917 257 aaKnown RBP19.71■□□□□ 0.75
TTC3-225ENST00000540756 EIF5AP63241 154 aaKnown RBP19.71■□□□□ 0.75
TTC3-225ENST00000540756 RUNX1Q01196 453 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 HNF4GQ14541 408 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 OR10W1Q8NGF6 305 aa19.71■□□□□ 0.75
TTC3-225ENST00000540756 LINC00862A6NCI5 91 aa19.7■□□□□ 0.74
TTC3-225ENST00000540756 VENTXO95231 258 aa19.7■□□□□ 0.74
TTC3-225ENST00000540756 USF1P22415 310 aaPredicted RBP19.7■□□□□ 0.74
TTC3-225ENST00000540756 LGALS7P47929 136 aa19.7■□□□□ 0.74
TTC3-225ENST00000540756 MAPK1IP1LQ8NDC0 245 aa19.7■□□□□ 0.74
TTC3-225ENST00000540756 HIPK2Q9H2X6 1198 aa19.7■□□□□ 0.74
TTC3-225ENST00000540756 IGHV3OR16-10A0A075B7F0 116 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 IFNA10P01566 189 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 UBE2E1P51965 193 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 LGALS4P56470 323 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 SLC38A11Q08AI6 406 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 ZNF266Q14584 549 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 THNSL2Q86YJ6 484 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 ZNF257Q9Y2Q1 563 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.69■□□□□ 0.741e-6■■■■■ 37
TTC3-225ENST00000540756 A0A096LNT2 108 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 FGF2P09038 288 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 ATP6V0CP27449 155 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 F2RL1P55085 397 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 PSG5Q15238 335 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 DEFB113Q30KQ7 82 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 VMA21Q3ZAQ7 101 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 STPG2Q8N412 459 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 LILRB2Q8N423 598 aa19.69■□□□□ 0.74
TTC3-225ENST00000540756 CENPVL3A0A0U1RRI6 287 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 A0A1B0GW64 132 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 CGB1A6NKQ9 187 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 IGKV1D-33P01593 117 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 IGKV1-33P01594 117 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 SPP1P10451 314 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 HBG1P69891 147 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 HBG2P69892 147 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 PRCDQ00LT1 54 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 PIP4P2Q8N4L2 257 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 VSTM2AQ8TAG5 236 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 CITED4Q96RK1 184 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 CLCC1Q96S66 551 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 CRYGBP07316 175 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 COMMD5Q9GZQ3 224 aa19.68■□□□□ 0.74
TTC3-225ENST00000540756 SAA4P35542 130 aa19.67■□□□□ 0.74
TTC3-225ENST00000540756 HABP2Q14520 560 aaPredicted RBP19.67■□□□□ 0.74
TTC3-225ENST00000540756 TSNAXQ99598 290 aaKnown RBP19.67■□□□□ 0.74
TTC3-225ENST00000540756 FBXL15Q9H469 300 aa19.67■□□□□ 0.74
TTC3-225ENST00000540756 NDUFA4L2Q9NRX3 87 aa19.67■□□□□ 0.74
TTC3-225ENST00000540756 ABCA1O95477 2261 aa19.67■□□□□ 0.74
TTC3-225ENST00000540756 FGF16O43320 207 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 MSMBP08118 114 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 CD1BP29016 333 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 MINOS1Q5TGZ0 78 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 RUSC1-AS1Q66K80 236 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 OR5B3Q8NH48 314 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 OR4A5Q8NH83 315 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 PLEKHA3Q9HB20 300 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 FKBP11Q9NYL4 201 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 METTL1Q9UBP6 276 aaKnown RBP19.66■□□□□ 0.74
TTC3-225ENST00000540756 SIGLEC9Q9Y336 463 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 MINOS1-NBL1R4GNA1 71 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 DFFBO76075 338 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 SLC25A16P16260 332 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 OR10P1Q8NGE3 313 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 RNF141Q8WVD5 230 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 ENY2Q9NPA8 101 aa19.66■□□□□ 0.74
TTC3-225ENST00000540756 UBE2L5PA0A1B0GUS4 154 aa19.65■□□□□ 0.74
TTC3-225ENST00000540756 SNRNP70P08621 437 aaKnown RBP19.65■□□□□ 0.74
TTC3-225ENST00000540756 COMMD7Q86VX2 200 aa19.65■□□□□ 0.74
TTC3-225ENST00000540756 TEX45Q8NA69 505 aa19.65■□□□□ 0.74
TTC3-225ENST00000540756 ITPR2Q14571 2701 aa19.65■□□□□ 0.74
TTC3-225ENST00000540756 ZNF705EA8MWA4 302 aaPredicted RBP19.64■□□□□ 0.74
TTC3-225ENST00000540756 FCN1O00602 326 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms