RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 IGHV7-81A0A0B4J1V7 117 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 A0A1B0GVG6 124 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 G3V3Q6 166 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 FCN1O00602 326 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 IGHG2P01859 326 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 CXCL3P19876 107 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 MAS1LP35410 378 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 COMPP49747 757 aaPredicted RBP8.34□□□□□ -1.07
VPS33A-204ENST00000540669 AKR1C2P52895 323 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 PJVKQ0ZLH3 352 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 HES1Q14469 280 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 FCN2Q15485 313 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 IZUMO4Q1ZYL8 232 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 MMD2Q8IY49 270 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 OR52E5Q8NH55 327 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 WIPF2Q8TF74 440 aaPredicted RBP8.34□□□□□ -1.07
VPS33A-204ENST00000540669 OR10C1Q96KK4 312 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 HSPB9Q9BQS6 159 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 ZNF702PQ9H963 129 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 C1RLQ9NZP8 487 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 METTL1Q9UBP6 276 aaKnown RBP8.34□□□□□ -1.07
VPS33A-204ENST00000540669 HSPB7Q9UBY9 170 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 CACNG5Q9UF02 275 aa8.34□□□□□ -1.07
VPS33A-204ENST00000540669 TEX22C9J3V5 150 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 FAM90A26D6RGX4 464 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 E7EUB6 86 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 TSPAN9O75954 239 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 CA2P00918 260 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 IGF1P05019 195 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 EGR2P11161 476 aaPredicted RBP8.33□□□□□ -1.08
VPS33A-204ENST00000540669 OR2B8PP59922 312 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 ERVK-16P61578 105 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 RPL8P62917 257 aaKnown RBP8.33□□□□□ -1.08
VPS33A-204ENST00000540669 CFHR3Q02985 330 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 HNF4GQ14541 408 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 SMCO1Q147U7 214 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 LY6EQ16553 131 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 BSXQ3C1V8 233 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 PVRIGQ6DKI7 326 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 ZNF562Q6V9R5 426 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 OR5B3Q8NH48 314 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 ASB13Q8WXK3 278 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 FYTTD1Q96QD9 318 aaKnown RBP8.33□□□□□ -1.08
VPS33A-204ENST00000540669 NDUFA4L2Q9NRX3 87 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 MGAT4CQ9UBM8 478 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 FBXO7Q9Y3I1 522 aa8.33□□□□□ -1.08
VPS33A-204ENST00000540669 IGLC7A0M8Q6 106 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 CCSO14618 274 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 HOXB5P09067 269 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 CX3CL1P78423 397 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 ID3Q02535 119 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 C10orf55Q5SWW7 151 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 ASPHD1Q5U4P2 390 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 Q6ZS46 218 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 SSX9Q7RTT3 188 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 H2BFWTQ7Z2G1 175 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 ZBTB8BQ8NAP8 495 aaPredicted RBP8.32□□□□□ -1.08
VPS33A-204ENST00000540669 DMBX1Q8NFW5 382 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 RRNAD1Q96FB5 475 aaKnown RBP8.32□□□□□ -1.08
VPS33A-204ENST00000540669 WDR89Q96FK6 387 aaPredicted RBP8.32□□□□□ -1.08
VPS33A-204ENST00000540669 SPIN2AQ99865 258 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 SPIN2BQ9BPZ2 258 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 SRSF8Q9BRL6 282 aaKnown RBP8.32□□□□□ -1.08
VPS33A-204ENST00000540669 C19orf24Q9BVV8 132 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 KIAA1456Q9P272 454 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 PRNDQ9UKY0 176 aa8.32□□□□□ -1.08
VPS33A-204ENST00000540669 RCL1Q9Y2P8 373 aaKnown RBP8.32□□□□□ -1.08
VPS33A-204ENST00000540669 HMX3A6NHT5 357 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 ST8SIA3O43173 380 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 NDUFA7O95182 113 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 BRI3O95415 125 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 GIPP09681 153 aaPredicted RBP8.31□□□□□ -1.08
VPS33A-204ENST00000540669 MYOD1P15172 320 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 VDAC2P45880 294 aaPredicted RBP8.31□□□□□ -1.08
VPS33A-204ENST00000540669 HSPE1P61604 102 aaKnown RBP8.31□□□□□ -1.08
VPS33A-204ENST00000540669 BLCAPP62952 87 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 PRCDQ00LT1 54 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 TNFRSF9Q07011 255 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 THOC7Q6I9Y2 204 aaKnown RBP8.31□□□□□ -1.08
VPS33A-204ENST00000540669 C12orf54Q6X4T0 127 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 ZNF114Q8NC26 417 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 SPATA3Q8NHX4 192 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 SRSF12Q8WXF0 261 aaKnown RBP8.31□□□□□ -1.08
VPS33A-204ENST00000540669 C2orf50Q96LR7 162 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 QTRT1Q9BXR0 403 aaKnown RBP8.31□□□□□ -1.08
VPS33A-204ENST00000540669 NMES1Q9C002 83 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 WNT10AQ9GZT5 417 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 C16orf95Q9H693 158 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.31□□□□□ -1.08
VPS33A-204ENST00000540669 CACFD1Q9UGQ2 172 aa8.31□□□□□ -1.08
VPS33A-204ENST00000540669 TEX50A0A1B0GTY4 177 aa8.3□□□□□ -1.08
VPS33A-204ENST00000540669 FAM181BA6NEQ2 426 aa8.3□□□□□ -1.08
VPS33A-204ENST00000540669 GOSR2O14653 212 aa8.3□□□□□ -1.08
VPS33A-204ENST00000540669 KCNAB3O43448 404 aa8.3□□□□□ -1.08
VPS33A-204ENST00000540669 SSNA1O43805 119 aa8.3□□□□□ -1.08
VPS33A-204ENST00000540669 LYL1P12980 280 aa8.3□□□□□ -1.08
VPS33A-204ENST00000540669 BCAP31P51572 246 aa8.3□□□□□ -1.08
VPS33A-204ENST00000540669 IAH1Q2TAA2 248 aaPredicted RBP8.3□□□□□ -1.08
VPS33A-204ENST00000540669 Q6ZSV7 163 aa8.3□□□□□ -1.08
VPS33A-204ENST00000540669 SGMS2Q8NHU3 365 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms