RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 Q6ZS49 121 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF826PQ6ZT77 177 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 FAM57BQ71RH2 274 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 SLC16A13Q7RTY0 426 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 STX12Q86Y82 276 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 FOXRED2Q8IWF2 684 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 C11orf53Q8IXP5 236 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 FAM24BQ8N5W8 94 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 OR2C3Q8N628 320 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 OR5AU1Q8NGC0 362 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 OR2G3Q8NGZ4 309 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 RNASE11Q8TAA1 199 aaKnown RBP4.8□□□□□ -1.64
CPSF7-219ENST00000539952 PIFOQ8TCI5 191 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 RTN4IP1Q8WWV3 396 aaPredicted RBP4.8□□□□□ -1.64
CPSF7-219ENST00000539952 IL22RA2Q969J5 263 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 Q96M66 194 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 NKX3-1Q99801 234 aaPredicted RBP4.8□□□□□ -1.64
CPSF7-219ENST00000539952 NIPSNAP3BQ9BS92 247 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 SCRT1Q9BWW7 348 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 GFOD1Q9NXC2 390 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 SLC7A11Q9UPY5 501 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 HYDINQ4G0P3 5121 aa4.8□□□□□ -1.64
CPSF7-219ENST00000539952 IGHV3OR15-7A0A075B7D8 119 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 IGKV1-9A0A0C4DH69 117 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 hCG_1809904A0A1W2PP81 198 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 A0A1W2PPE2 198 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 A0A1W2PPH5 198 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 A0A1W2PR64 198 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 A0A1W2PRV1 198 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 TCRBV4S1A1TA0A5B7 111 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 ANKRD30BLA7E2S9 258 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 TRDCB7Z8K6 153 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 TSTD3H0UI37 97 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 K7N7A8 449 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 PPP1R2P9O14990 202 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 AGPAT2O15120 278 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 TXNL1O43396 289 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 ANGPTL7O43827 346 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 PITX3O75364 302 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 CLN5O75503 358 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 SCGB1D2O95969 90 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 IFNA1P01562 189 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 OR8U8P0C7N1 319 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 TMEM225BP0DP42 221 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 SLC25A6P12236 298 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 SERPINA2P20848 420 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 OTX1P32242 354 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 NKX2-1P43699 371 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 HAAOP46952 286 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 GLIPR1P48060 266 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 RBP2P50120 134 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 UBE2KP61086 200 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 PKIAP61925 76 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 HOXA4Q00056 320 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 KLRD1Q13241 179 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 UBE2V2Q15819 145 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 AKIRIN2Q53H80 203 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF506Q5JVG8 444 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 AKR1C8PQ5T2L2 129 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 RNF144BQ7Z419 303 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 CENPVQ7Z7K6 275 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF429Q86V71 674 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 FAM219AQ8IW50 185 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 H1FOOQ8IZA3 346 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 PNKDQ8N490 385 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 OR4D5Q8NGN0 318 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 LRRC29Q8WV35 223 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 H1FXQ92522 213 aaKnown RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 MOB3AQ96BX8 217 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 BORCS8Q96FH0 119 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 TMEM56Q96MV1 263 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 GGACTQ9BVM4 153 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 RIMS4Q9H426 269 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 ZNF702PQ9H963 129 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 ELL3Q9HB65 397 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 PNRC2Q9NPJ4 139 aaKnown RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 SLC25A10Q9UBX3 287 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 PIGLQ9Y2B2 252 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 TSSC4Q9Y5U2 329 aaPredicted RBP4.79□□□□□ -1.64
CPSF7-219ENST00000539952 TMEM56-RWDD3S4R434 201 aa4.79□□□□□ -1.64
CPSF7-219ENST00000539952 C3orf85A0A1B0GTC6 90 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 C9JQL5 133 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 H3BQ15 152 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 M0R135 149 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 MPPED1O15442 326 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 RAMP3O60896 148 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 SCAF4O95104 1147 aaKnown RBP4.78□□□□□ -1.64
CPSF7-219ENST00000539952 IFNA5P01569 189 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 SRP19P09132 144 aaKnown RBP4.78□□□□□ -1.64
CPSF7-219ENST00000539952 HIST1H1BP16401 226 aaKnown RBP4.78□□□□□ -1.64
CPSF7-219ENST00000539952 NDUFB7P17568 137 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 PI3P19957 117 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 FUT3P21217 361 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 VDAC1P21796 283 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 UCP1P25874 307 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 NDUFA6P56556 154 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 RPL23AP62750 156 aaKnown RBP4.78□□□□□ -1.64
CPSF7-219ENST00000539952 HLA-DRB3P79483 266 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 SERF2P84101 59 aa4.78□□□□□ -1.64
CPSF7-219ENST00000539952 EWSR1Q01844 656 aaKnown RBP eCLIP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms