RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 CTRB2Q6GPI1 263 aa11.56□□□□□ -0.56
UBE3B-211ENST00000539843 HSD17B13Q7Z5P4 300 aaPredicted RBP11.56□□□□□ -0.56
UBE3B-211ENST00000539843 CROCCP3Q8IVE0 287 aa11.56□□□□□ -0.56
UBE3B-211ENST00000539843 DMBX1Q8NFW5 382 aa11.56□□□□□ -0.56
UBE3B-211ENST00000539843 OR52B4Q8NGK2 314 aa11.56□□□□□ -0.56
UBE3B-211ENST00000539843 ZC4H2Q9NQZ6 224 aa11.56□□□□□ -0.56
UBE3B-211ENST00000539843 ZNF785A8K8V0 405 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 A8MWP6 167 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 SULT1C2O00338 296 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 CD7P09564 240 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 AREGP15514 252 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 CBLN1P23435 193 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 EIF4EBP1Q13541 118 aaPredicted RBP11.55□□□□□ -0.56
UBE3B-211ENST00000539843 RBPMS2Q6ZRY4 209 aaKnown RBP11.55□□□□□ -0.56
UBE3B-211ENST00000539843 TMEM17Q86X19 198 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 DEFB125Q8N687 156 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 TSPAN14Q8NG11 270 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 S100A16Q96FQ6 103 aaKnown RBP11.55□□□□□ -0.56
UBE3B-211ENST00000539843 FANCD2OSQ96PS1 177 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 HIPK2Q9H2X6 1198 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 UFC1Q9Y3C8 167 aa11.55□□□□□ -0.56
UBE3B-211ENST00000539843 TNCP24821 2201 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 ATP6V1G2O95670 118 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 REG1AP05451 166 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 FGF2P09038 288 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 MYOD1P15172 320 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 S100GP29377 79 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 PLET1Q6UQ28 207 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 GVQW1Q8N7I0 195 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 OR5AP2Q8NGF4 316 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 OR51H1Q8NH63 302 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 WDR89Q96FK6 387 aaPredicted RBP11.54□□□□□ -0.56
UBE3B-211ENST00000539843 CCDC140Q96MF4 163 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 AUNIPQ9H7T9 357 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 PLEKHA2Q9HB19 425 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 VCX3AQ9NNX9 186 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 COMMD9Q9P000 198 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 S4R3C0 116 aa11.54□□□□□ -0.56
UBE3B-211ENST00000539843 IGLV11-55A0A075B6I3 123 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 TRAV25A0A0B4J276 109 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 E7EUB6 86 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 CLEC3BP05452 202 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 GPR183P32249 361 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 NEDD8Q15843 81 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 ADAMTSL5Q6ZMM2 481 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 C19orf35Q6ZS72 473 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 CMTM1Q8IZ96 169 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 SLC38A6Q8IZM9 456 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 UXS1Q8NBZ7 420 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 OR5H6Q8NGV6 325 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 GIMAP1Q8WWP7 306 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 SLC25A38Q96DW6 304 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 GPHA2Q96T91 129 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 FAM110AQ9BQ89 295 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 QTRT1Q9BXR0 403 aaKnown RBP11.53□□□□□ -0.56
UBE3B-211ENST00000539843 RETNQ9HD89 108 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 TMEM140Q9NV12 185 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 EHFQ9NZC4 300 aa11.53□□□□□ -0.56
UBE3B-211ENST00000539843 MRPL27Q9P0M9 148 aaKnown RBP11.53□□□□□ -0.56
UBE3B-211ENST00000539843 DNAH7Q8WXX0 4024 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 TMEM213A2RRL7 107 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 UPK2O00526 184 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 CLEC2LP0C7M8 214 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 ELLP55199 621 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-211ENST00000539843 TAS2R46P59540 309 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 OR2B8PP59922 312 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 POU2AF1Q16633 256 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 KLK9Q2XQG4 91 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 BTNL8Q6UX41 500 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 LINC00322Q6ZN03 302 aaPredicted RBP11.52□□□□□ -0.57
UBE3B-211ENST00000539843 TMEM61Q8N0U2 210 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 OR1L6Q8NGR2 347 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 CACNG8Q8WXS5 425 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 GGTLC1Q9BX51 225 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 KLK9Q9UKQ9 250 aa11.52□□□□□ -0.57
UBE3B-211ENST00000539843 LOC102724200A0A096LPH7 203 aaPredicted RBP11.51□□□□□ -0.57
UBE3B-211ENST00000539843 XRCC3O43542 346 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 SNAPC5O75971 98 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 SCAF4O95104 1147 aaKnown RBP11.51□□□□□ -0.57
UBE3B-211ENST00000539843 FCER2P06734 321 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 TRAPPC2P0DI81 140 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 TRAPPC2BP0DI82 140 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 PTBP1P26599 531 aaKnown RBP eCLIP11.51□□□□□ -0.57
UBE3B-211ENST00000539843 BRWD1-AS2P59051 145 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 UBE2NLQ5JXB2 153 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 TMEM69Q5SWH9 247 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 LAMTOR1Q6IAA8 161 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 ZNF818PQ6ZRF7 136 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 GDPD1Q8N9F7 314 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 OR1L8Q8NGR8 309 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 OR5H2Q8NGV7 314 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 VN1R17PQ8TDU5 208 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 WFDC10AQ9H1F0 79 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 DMRT1Q9Y5R6 373 aa11.51□□□□□ -0.57
UBE3B-211ENST00000539843 RBMY1BA6NDE4 496 aaKnown RBP11.5□□□□□ -0.57
UBE3B-211ENST00000539843 RBMY1EA6NEQ0 496 aaKnown RBP11.5□□□□□ -0.57
UBE3B-211ENST00000539843 MFSD2BA6NFX1 497 aa11.5□□□□□ -0.57
UBE3B-211ENST00000539843 MARCH11A6NNE9 402 aa11.5□□□□□ -0.57
UBE3B-211ENST00000539843 S1PR2O95136 353 aa11.5□□□□□ -0.57
UBE3B-211ENST00000539843 RBMY1DP0C7P1 496 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms