RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 AKIRIN1Q9H9L7 192 aaPredicted RBP4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 MPDZO75970 2070 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 GAGE12JA6NER3 117 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 SMIM9A6NGZ8 99 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 FOXI3A8MTJ6 420 aaPredicted RBP4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ZNF878C9JN71 531 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 SOCS1O15524 211 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 GAGE7O76087 117 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 CER1O95813 267 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 SPINK8P0C7L1 97 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 GAGE12FP0CL80 117 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 GAGE12GP0CL81 117 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 GAGE12IP0CL82 117 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 COX8AP10176 69 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 HIST1H1DP16402 221 aaKnown RBP4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ALOX5APP20292 161 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 OR3A4PP47883 348 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 SUMO3P55854 103 aaPredicted RBP4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 GAGE4Q13068 117 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 SGCBQ16585 318 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 CPEB2Q7Z5Q1 589 aaKnown RBP4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 OR10G9Q8NGN4 311 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 DNAJC30Q96LL9 226 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 VGLL1Q99990 258 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 KLHL13Q9P2N7 655 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 POLDIP2Q9Y2S7 368 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 TIMM9Q9Y5J7 89 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 LY96Q9Y6Y9 160 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 PI4KAP42356 2102 aa4.82□□□□□ -1.64
RAB3GAP1-207ENST00000539493 FAM24AA6NFZ4 105 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 C11orf98E9PRG8 122 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 RER1O15258 196 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 XRCC2O43543 280 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 CELA2AP08217 269 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ZNF146Q15072 292 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 FAM69BQ5VUD6 431 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 C1orf140Q5VVS0 124 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 MRPL14Q6P1L8 145 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 Q6ZUT4 128 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 FAM57BQ71RH2 274 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ZNF439Q8NDP4 499 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 OR1L1Q8NH94 360 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 FAM103A1Q9BTL3 118 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 NAA60Q9H7X0 242 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 OR1A1Q9P1Q5 309 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 TMEM14AQ9Y6G1 99 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ASCC3Q8N3C0 2202 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 TMEM8BA6NDV4 472 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 LRRC30A6NM36 301 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 H3BUT2 72 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 DXOO77932 396 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 RENP00797 406 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 CRYGBP07316 175 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 FABP2P12104 132 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 CBLN1P23435 193 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 SRIP30626 198 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 CFHR2P36980 270 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 RPS27P42677 84 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 PSMB3P49720 205 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 DYNLT3P51808 116 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 TMPRSS3P57727 454 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ERVK11-1P61568 191 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 RPL8P62917 257 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ROM1Q03395 351 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 TIMM23BQ5SRD1 257 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 Q6Q795 121 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 OR5C1Q8NGR4 320 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 RNF138Q8WVD3 245 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 DDB2Q92466 427 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 WDR76Q9H967 626 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 NTN3O00634 580 aaPredicted RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 SRSF10O75494 262 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 VSIG8P0DPA2 414 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 PI3P19957 117 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 HTR1DP28221 377 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 RPL27P61353 136 aaKnown RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 IL11RAQ14626 422 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 CLEC12BQ2HXU8 276 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 PRR30Q53SZ7 412 aaPredicted RBP4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 LCN12Q6JVE5 192 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ST8SIA1Q92185 356 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 SH2D2AQ9NP31 389 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 TAS2R4Q9NYW5 299 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ONECUT1Q9UBC0 465 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 MSRB2Q9Y3D2 182 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ADAMTS9Q9P2N4 1935 aa4.81□□□□□ -1.64
RAB3GAP1-207ENST00000539493 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 KBTBD11-OT1A0A1B0GTJ5 212 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 A0A1W2PRE2 83 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 PRSS37A4D1T9 235 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 FAM90A26D6RGX4 464 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 SYS1-DBNDD2H3BUS1 97 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 CEACAM4O75871 244 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 ZFAND5O76080 213 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 HIST1H1EP10412 219 aaKnown RBP4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 TNFRSF1AP19438 455 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 CR1LQ2VPA4 569 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 FAM120AOSQ5T036 256 aa4.8□□□□□ -1.64
RAB3GAP1-207ENST00000539493 Q6AWC8 147 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms