RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CEP19Q96LK0 163 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 LINC00477Q96M19 166 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 MND1Q9BWT6 205 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 GGTLC1Q9BX51 225 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF436Q9C0F3 470 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF430Q9H8G1 570 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM27Q9HBJ8 222 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 SLC35A3Q9Y2D2 325 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 SBDSQ9Y3A5 250 aaKnown RBP eCLIP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 EML5Q05BV3 1969 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ABCA13Q86UQ4 5058 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 PCNTO95613 3336 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 REV3LO60673 3130 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 SIPA1L3O60292 1781 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 PZPP20742 1482 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 CPSF1Q10570 1443 aaKnown RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 NAIPQ13075 1403 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ATP5G1P05496 136 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ATF1P18846 271 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF83P51522 516 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 DLX6P56179 175 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 LINC00313P59037 77 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 KRTAP10-8P60410 259 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 RPS28P62857 69 aaKnown RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 DYNLL1P63167 89 aaKnown RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 EMX1Q04741 257 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 AESQ08117 197 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 LAMTOR4Q0VGL1 99 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 EBI3Q14213 229 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 DEFB116Q30KQ4 102 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 CCSMST1Q4G0I0 132 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 MORN2Q502X0 79 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 LINC00483Q53H64 154 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 FAM201AQ5SY85 155 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 PRR9Q5T870 116 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 TMPPEQ6ZT21 453 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 PGAM4Q8N0Y7 254 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 EXOC3-AS1Q8N2X6 119 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 C12orf29Q8N999 325 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 OR11L1Q8NGX0 322 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 FNDC9Q8TBE3 224 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ZCCHC13Q8WW36 166 aaKnown RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM106AQ96A25 262 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 KCTD7Q96MP8 289 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 QKIQ96PU8 341 aaKnown RBP eCLIP0.57□□□□□ -2.327e-7■■■■■ 29
HIF1A-204ENST00000539097 TIMM17AQ99595 171 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 C7orf50Q9BRJ6 194 aaKnown RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 MARVELD1Q9BSK0 173 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 FAAP24Q9BTP7 215 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 METTL9Q9H1A3 318 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 NMNAT1Q9HAN9 279 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ASB4Q9Y574 426 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF706Q9Y5V0 76 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 PRRC2BQ5JSZ5 2229 aaKnown RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 RP1P56715 2156 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 DSCAML1Q8TD84 2053 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 HEATR5AQ86XA9 2040 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 DOCK1Q14185 1865 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ARAP2Q8WZ64 1704 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 SCN7AQ01118 1682 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 UBR5O95071 2799 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 NKTRP30414 1462 aaKnown RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ARHGAP35Q9NRY4 1499 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 PPIP5K1Q6PFW1 1433 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 FREM1Q5H8C1 2179 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 TRBV24-1A0A075B6N3 115 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 IGKV6D-41A0A0C4DH26 115 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF850A8MQ14 1090 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 IGLL5B9A064 214 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 H7BYZ3 331 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 J3QT63 122 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 MED6O75586 246 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 IFNA14P01570 189 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 IGLV3-19P01714 112 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 RLN2P04090 185 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ADRA2AP08913 450 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 CDK2P24941 298 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 IL3RAP26951 378 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 LRRN1Q6UXK5 716 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 CLEC20AQ6ZU45 233 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 FA2HQ7L5A8 372 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 FAM19A3Q7Z5A8 133 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 CLVS1Q8IUQ0 354 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 CCDC54Q8NEL0 328 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 OR4K5Q8NGD3 323 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 OR13C4Q8NGS5 318 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 LHFPL5Q8TAF8 219 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 TVP23CQ96ET8 276 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 OLFM3Q96PB7 478 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 SEC22CQ9BRL7 303 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 SPANXA1Q9NS26 97 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 TAS2R13Q9NYV9 303 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 YTHDF2Q9Y5A9 579 aaKnown RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ARL5AQ9Y689 179 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF780BQ9Y6R6 833 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 VPS13DQ5THJ4 4388 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 MDN1Q9NU22 5596 aa0.57□□□□□ -2.32
HIF1A-204ENST00000539097 SETD2Q9BYW2 2564 aaPredicted RBP0.57□□□□□ -2.32
HIF1A-204ENST00000539097 PCNX2A6NKB5 2137 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms