RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 GATAD1Q8WUU5 269 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 STARD4Q96DR4 205 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 GNG12Q9UBI6 72 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 GAB2Q9UQC2 676 aa12.03□□□□□ -0.48
CDCA3-207ENST00000538862 F2RL2O00254 374 aa12.02□□□□□ -0.49
CDCA3-207ENST00000538862 FCGR3BO75015 233 aa12.02□□□□□ -0.49
CDCA3-207ENST00000538862 EGR1P18146 543 aa12.02□□□□□ -0.49
CDCA3-207ENST00000538862 KIR2DS2P43631 304 aa12.02□□□□□ -0.49
CDCA3-207ENST00000538862 RPS16P62249 146 aaKnown RBP12.02□□□□□ -0.49
CDCA3-207ENST00000538862 KRTCAP3Q53RY4 240 aa12.02□□□□□ -0.49
CDCA3-207ENST00000538862 DMRTC2Q8IXT2 367 aaPredicted RBP12.02□□□□□ -0.49
CDCA3-207ENST00000538862 OR4X1Q8NH49 305 aa12.02□□□□□ -0.49
CDCA3-207ENST00000538862 PSMG3-AS1Q96PY0 264 aa12.02□□□□□ -0.49
CDCA3-207ENST00000538862 HEATR1Q9H583 2144 aaKnown RBP12.02□□□□□ -0.49
CDCA3-207ENST00000538862 SLC25A15Q9Y619 301 aa12.02□□□□□ -0.49
CDCA3-207ENST00000538862 HCFC1P51610 2035 aa12.02□□□□□ -0.49
CDCA3-207ENST00000538862 CENPEQ02224 2701 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 C11orf94C9JXX5 98 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 ITGB1BP1O14713 200 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 PDE6DO43924 150 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 HRASP01112 189 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 GYPAP02724 150 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 LOXL3P58215 753 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 ERVK-16P61578 105 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 PRAMEF5Q5TYX0 476 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 C2orf88Q9BSF0 95 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 OPN3Q9H1Y3 402 aaPredicted RBP12.01□□□□□ -0.49
CDCA3-207ENST00000538862 PRR14LQ5THK1 2151 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 IFNA10P01566 189 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 HIST1H1BP16401 226 aaKnown RBP12.01□□□□□ -0.49
CDCA3-207ENST00000538862 SRP14P37108 136 aaKnown RBP12.01□□□□□ -0.49
CDCA3-207ENST00000538862 OPRK1P41145 380 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 VDAC2P45880 294 aaPredicted RBP12.01□□□□□ -0.49
CDCA3-207ENST00000538862 RBPJQ06330 500 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 LTC4SQ16873 150 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 SAPCD1Q5SSQ6 148 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 S100PBPQ96BU1 408 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 TXNDC17Q9BRA2 123 aa12.01□□□□□ -0.49
CDCA3-207ENST00000538862 CHTOPQ9Y3Y2 248 aaKnown RBP12.01□□□□□ -0.49
CDCA3-207ENST00000538862 INTS1Q8N201 2190 aaKnown RBP12.01□□□□□ -0.49
CDCA3-207ENST00000538862 PPP5D1E7EU14 171 aa12□□□□□ -0.49
CDCA3-207ENST00000538862 M0R1X1 148 aa12□□□□□ -0.49
CDCA3-207ENST00000538862 CCL21O00585 134 aa12□□□□□ -0.49
CDCA3-207ENST00000538862 IGHV3-13P01766 116 aa12□□□□□ -0.49
CDCA3-207ENST00000538862 FAM3BP58499 235 aaPredicted RBP12□□□□□ -0.49
CDCA3-207ENST00000538862 GCSAMQ8N6F7 178 aa12□□□□□ -0.49
CDCA3-207ENST00000538862 ZNF383Q8NA42 475 aa12□□□□□ -0.49
CDCA3-207ENST00000538862 RAB9BQ9NP90 201 aa12□□□□□ -0.49
CDCA3-207ENST00000538862 DUSP13Q9UII6 198 aa12□□□□□ -0.49
CDCA3-207ENST00000538862 CRYBG3Q68DQ2 2970 aa12□□□□□ -0.49
CDCA3-207ENST00000538862 A0A1W2PPV4 95 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 MBD3L4A6NDZ8 208 aaPredicted RBP11.99□□□□□ -0.49
CDCA3-207ENST00000538862 MBD3L3A6NE82 208 aaPredicted RBP11.99□□□□□ -0.49
CDCA3-207ENST00000538862 MBD3L5A6NJ08 208 aaPredicted RBP11.99□□□□□ -0.49
CDCA3-207ENST00000538862 GGCTO75223 188 aaKnown RBP11.99□□□□□ -0.49
CDCA3-207ENST00000538862 FABP4P15090 132 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 CA7P43166 264 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 RAB7AP51149 207 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 RELBQ01201 579 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 PDZD11Q5EBL8 140 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 COA6Q5JTJ3 125 aaKnown RBP11.99□□□□□ -0.49
CDCA3-207ENST00000538862 TREML4Q6UXN2 200 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 TMEM183AQ8IXX5 376 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 MBD3L2Q8NHZ7 208 aaPredicted RBP11.99□□□□□ -0.49
CDCA3-207ENST00000538862 S1PR3Q99500 378 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 IFI27L2Q9H2X8 130 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 KCNIP2Q9NS61 270 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 ZNF835Q9Y2P0 537 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 CYSRT1A8MQ03 144 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 PRSS46E5RG02 174 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 F6UZH7 168 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 TMPRSS2O15393 492 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 LHBP01229 141 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 CD99P14209 185 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 C3orf36Q3SXR2 165 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 REC114Q7Z4M0 266 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 Q8TCH9 128 aa11.99□□□□□ -0.49
CDCA3-207ENST00000538862 HEYLQ9NQ87 328 aaPredicted RBP11.99□□□□□ -0.49
CDCA3-207ENST00000538862 TCAPO15273 167 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 TYMSP04818 313 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 CGB3P0DN86 165 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 CGB7P0DN87 165 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 NPPCP23582 126 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 COL8A1P27658 744 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 GLRXP35754 106 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 ZNF134P52741 427 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 CASP6P55212 293 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 MSMPQ1L6U9 139 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 RPL39P5Q59GN2 51 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 C16orf54Q6UWD8 224 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 LRP11Q86VZ4 500 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 NECAP1Q8NC96 275 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 OR2T10Q8NGZ9 312 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 DDB2Q92466 427 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 MEGF10Q96KG7 1140 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 PACRGQ96M98 296 aaPredicted RBP11.98□□□□□ -0.49
CDCA3-207ENST00000538862 HIST1H2BLQ99880 126 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 CALYQ9NYX4 217 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 EDDM3BP56851 147 aa11.98□□□□□ -0.49
CDCA3-207ENST00000538862 LCN2P80188 198 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms