RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 LIPFP07098 398 aa12.02□□□□□ -0.49
ATL3-203ENST00000538786 IGFBP2P18065 325 aa12.02□□□□□ -0.49
ATL3-203ENST00000538786 SLC24A4Q8NFF2 622 aa12.02□□□□□ -0.49
ATL3-203ENST00000538786 OR5B3Q8NH48 314 aa12.02□□□□□ -0.49
ATL3-203ENST00000538786 TMEM170AQ8WVE7 144 aa12.02□□□□□ -0.49
ATL3-203ENST00000538786 PATZ1Q9HBE1 687 aaKnown RBP12.02□□□□□ -0.49
ATL3-203ENST00000538786 WDR83OSQ9Y284 106 aa12.02□□□□□ -0.49
ATL3-203ENST00000538786 RELNP78509 3460 aa12.02□□□□□ -0.49
ATL3-203ENST00000538786 ELLP55199 621 aaPredicted RBP12.01□□□□□ -0.49
ATL3-203ENST00000538786 DLK1P80370 383 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 ZNF726P1Q15940 193 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 HLA-DRB5Q30154 266 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 BEND2Q8NDZ0 799 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 OR4A5Q8NH83 315 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 VSTM2AQ8TAG5 236 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 RCC1LQ96I51 464 aaKnown RBP12.01□□□□□ -0.49
ATL3-203ENST00000538786 UBTD1Q9HAC8 227 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 PLEKHA3Q9HB20 300 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 SMG1Q96Q15 3661 aaKnown RBP12.01□□□□□ -0.49
ATL3-203ENST00000538786 TEX50A0A1B0GTY4 177 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 C17orf112F2Z3M2 114 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 MBP02144 154 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 IFNA4P05014 189 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 MYOD1P15172 320 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 NPY1RP25929 384 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 RARRES2Q99969 163 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 HINT2Q9BX68 163 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 SLC35B3Q9H1N7 401 aa12.01□□□□□ -0.49
ATL3-203ENST00000538786 A6NNC1 897 aa12□□□□□ -0.49
ATL3-203ENST00000538786 C22orf46C9J442 243 aa12□□□□□ -0.49
ATL3-203ENST00000538786 MPDU1O75352 247 aa12□□□□□ -0.49
ATL3-203ENST00000538786 USF1P22415 310 aaPredicted RBP12□□□□□ -0.49
ATL3-203ENST00000538786 HNF4GQ14541 408 aa12□□□□□ -0.49
ATL3-203ENST00000538786 ACSM6Q6P461 480 aa12□□□□□ -0.49
ATL3-203ENST00000538786 TMEM167AQ8TBQ9 72 aa12□□□□□ -0.49
ATL3-203ENST00000538786 BUB1B-PAK6H3BSN5 160 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 DNASE2O00115 360 aaPredicted RBP11.99□□□□□ -0.49
ATL3-203ENST00000538786 CA2P00918 260 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 IGLV2-23P01705 113 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 CDKN1AP38936 164 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 ATP5IP56385 69 aaPredicted RBP11.99□□□□□ -0.49
ATL3-203ENST00000538786 RPL8P62917 257 aaKnown RBP11.99□□□□□ -0.49
ATL3-203ENST00000538786 ZNF506Q5JVG8 444 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 ZNF787Q6DD87 383 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 RPP25LQ8N5L8 163 aaKnown RBP11.99□□□□□ -0.49
ATL3-203ENST00000538786 CLDND2Q8NHS1 167 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 ONECUT1Q9UBC0 465 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 SOX15O60248 233 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 IGKV1D-33P01593 117 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 IGKV1-33P01594 117 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 DLX1P56177 255 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 HAGHQ16775 308 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 FFAR4Q5NUL3 377 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 LCN15Q6UWW0 184 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 TREML4Q6UXN2 200 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 SSX7Q7RTT5 188 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 SSBP3Q9BWW4 388 aaPredicted RBP11.99□□□□□ -0.49
ATL3-203ENST00000538786 COMMD5Q9GZQ3 224 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 AMMECR1Q9Y4X0 333 aaPredicted RBP11.99□□□□□ -0.49
ATL3-203ENST00000538786 HIVEP3Q5T1R4 2406 aa11.99□□□□□ -0.49
ATL3-203ENST00000538786 LOC105371242A0A075B767 164 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 SMCO3A2RU48 225 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 OPN1MWP04001 364 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 OPN1MW2P0DN77 364 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 OPN1MW3P0DN78 364 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 GPR6P46095 362 aaPredicted RBP11.98□□□□□ -0.49
ATL3-203ENST00000538786 LGALS7P47929 136 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 Q8N7P7 452 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 SLC39A9Q9NUM3 307 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 IGSF10Q6WRI0 2623 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 MAP1LC3B2A6NCE7 125 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 FAM74A7A6NL05 159 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 INS-IGF2F8WCM5 200 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 HSPB1P04792 205 aaKnown RBP11.98□□□□□ -0.49
ATL3-203ENST00000538786 COX7A1P24310 79 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 NPBWR1P48145 328 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 EFNA4P52798 201 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 ICAM4Q14773 271 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 VMA21Q3ZAQ7 101 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 FAM74A3Q4VXF1 159 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 KHDC3LQ587J8 217 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 OR4P4Q8NGL7 312 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 OR10G4Q8NGN3 311 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 OR10G9Q8NGN4 311 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 OR10G7Q8NGN6 311 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 OR1L8Q8NGR8 309 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 MAP1LC3BQ9GZQ8 125 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 NDUFA4L2Q9NRX3 87 aa11.98□□□□□ -0.49
ATL3-203ENST00000538786 ABCA4P78363 2273 aa11.97□□□□□ -0.49
ATL3-203ENST00000538786 IGHV1-3A0A0C4DH29 117 aa11.97□□□□□ -0.49
ATL3-203ENST00000538786 FNDC10F2Z333 226 aa11.97□□□□□ -0.49
ATL3-203ENST00000538786 M0R1W7 72 aa11.97□□□□□ -0.49
ATL3-203ENST00000538786 PRB3Q04118 309 aaPredicted RBP11.97□□□□□ -0.49
ATL3-203ENST00000538786 BSXQ3C1V8 233 aa11.97□□□□□ -0.49
ATL3-203ENST00000538786 C2orf83Q53S99 150 aa11.97□□□□□ -0.49
ATL3-203ENST00000538786 CLRN3Q8NCR9 226 aa11.97□□□□□ -0.49
ATL3-203ENST00000538786 NPVFQ9HCQ7 196 aa11.97□□□□□ -0.49
ATL3-203ENST00000538786 GNG13Q9P2W3 67 aa11.97□□□□□ -0.49
ATL3-203ENST00000538786 INSIG2Q9Y5U4 225 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms