RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 FAM74A3Q4VXF1 159 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 OR5AN1Q8NGI8 311 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 RAB1CQ92928 201 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 ADTRPQ96IZ2 230 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 AIFM2Q9BRQ8 373 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 NBPF19A0A087WUL8 3843 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 HRASP01112 189 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 CD5P06127 495 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 OR13C7P0DN81 318 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 FBLN7Q53RD9 439 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 FLYWCH2Q96CP2 140 aaKnown RBP11.43□□□□□ -0.58
ACTN1-205ENST00000538545 CLCC1Q96S66 551 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 LPAR2Q9HBW0 351 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 HILPDAQ9Y5L2 63 aa11.43□□□□□ -0.58
ACTN1-205ENST00000538545 A6NNC1 897 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 FAM157AC9JC47 383 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 APOA2P02652 100 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 OR8U8P0C7N1 319 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 NPBWR1P48145 328 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 LHFPL4Q7Z7J7 247 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 OR10A7Q8NGE5 316 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 LHX4Q969G2 390 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 TIMD4Q96H15 378 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 HIPK2Q9H2X6 1198 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.42□□□□□ -0.585e-7■■■□□ 17.7
ACTN1-205ENST00000538545 TEX50A0A1B0GTY4 177 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 UPK2O00526 184 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 CA2P00918 260 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 ARG1P05089 322 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 HSPE1P61604 102 aaKnown RBP11.42□□□□□ -0.58
ACTN1-205ENST00000538545 LCN2P80188 198 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 CIB3Q96Q77 187 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-205ENST00000538545 C20orf24Q9BUV8 137 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 SLC25A22Q9H936 323 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 CHODLQ9H9P2 273 aa11.42□□□□□ -0.58
ACTN1-205ENST00000538545 TRBV23-1A0A0A0MS06 115 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 IGLV1-47P01700 117 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 REG1AP05451 166 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 AGAP20933 346 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 GPR6P46095 362 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-205ENST00000538545 LGALS4P56470 323 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 HLA-DRB5Q30154 266 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 UQCC3Q6UW78 93 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 ZNF429Q86V71 674 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 RPP25LQ8N5L8 163 aaKnown RBP11.41□□□□□ -0.58
ACTN1-205ENST00000538545 C17orf50Q8WW18 174 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 RCC1LQ96I51 464 aaKnown RBP11.41□□□□□ -0.58
ACTN1-205ENST00000538545 SSBP3Q9BWW4 388 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-205ENST00000538545 TMPRSS5Q9H3S3 457 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 MIOXQ9UGB7 285 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 KBTBD11O94819 623 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 IGFBP2P18065 325 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 OR4P4Q8NGL7 312 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 TMEM186Q96B77 213 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 TMEM147Q9BVK8 224 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 NPCDR1Q9BY65 106 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 BPESC1Q9GZL8 116 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 FOXA2Q9Y261 457 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-205ENST00000538545 A0A1B0GW64 132 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 RAB5CP51148 216 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 DVL1P1P54792 670 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-205ENST00000538545 AARDQ4LEZ3 155 aa11.41□□□□□ -0.58
ACTN1-205ENST00000538545 NEU4Q8WWR8 484 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-205ENST00000538545 PATZ1Q9HBE1 687 aaKnown RBP11.41□□□□□ -0.58
ACTN1-205ENST00000538545 CSPG4Q6UVK1 2322 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 A0A087X0M5 115 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 A0A1B0GX30 115 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 ZFP92A6NM28 416 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 UMAD1C9J7I0 102 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 BUB1B-PAK6H3BSN5 160 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 TRIM77I1YAP6 450 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 IGLV2-23P01705 113 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 CD1BP29016 333 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 ARSJQ5FYB0 599 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-205ENST00000538545 SLC24A4Q8NFF2 622 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 SSMEM1Q8WWF3 244 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 C1orf159Q96HA4 380 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 CLEC7AQ9BXN2 247 aa11.4□□□□□ -0.58
ACTN1-205ENST00000538545 A1L4Q6 167 aa11.4□□□□□ -0.59
ACTN1-205ENST00000538545 SOX15O60248 233 aa11.4□□□□□ -0.59
ACTN1-205ENST00000538545 IL6RP08887 468 aaPredicted RBP11.4□□□□□ -0.59
ACTN1-205ENST00000538545 CBLN2Q8IUK8 224 aa11.4□□□□□ -0.59
ACTN1-205ENST00000538545 OR4C13Q8NGP0 309 aa11.4□□□□□ -0.59
ACTN1-205ENST00000538545 RXFP4Q8TDU9 374 aa11.4□□□□□ -0.59
ACTN1-205ENST00000538545 FAM216AQ8WUB2 273 aa11.4□□□□□ -0.59
ACTN1-205ENST00000538545 PINX1Q96BK5 328 aaKnown RBP11.4□□□□□ -0.59
ACTN1-205ENST00000538545 RAB39BQ96DA2 213 aa11.4□□□□□ -0.59
ACTN1-205ENST00000538545 ZNF430Q9H8G1 570 aaPredicted RBP11.4□□□□□ -0.59
ACTN1-205ENST00000538545 GNG13Q9P2W3 67 aa11.4□□□□□ -0.59
ACTN1-205ENST00000538545 ANKRD17O75179 2603 aaKnown RBP11.39□□□□□ -0.59
ACTN1-205ENST00000538545 UBR5O95071 2799 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-205ENST00000538545 LOC105371242A0A075B767 164 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 CGB1A6NKQ9 187 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 PRSS46E5RG02 174 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 TSPAN4O14817 238 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 LIPFP07098 398 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 NPY1RP25929 384 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 TMEM30BQ3MIR4 351 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 FFAR4Q5NUL3 377 aa11.39□□□□□ -0.59
ACTN1-205ENST00000538545 TREML4Q6UXN2 200 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms