RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 TMEM177Q53S58 311 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 TEPPQ6URK8 271 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 C22orf34Q6ZV56 151 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 ZNF383Q8NA42 475 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 OR10X1Q8NGY0 326 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 H1FXQ92522 213 aaKnown RBP5.44□□□□□ -1.54
USP28-206ENST00000538224 LEAP2Q969E1 77 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 RAB24Q969Q5 203 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 BTF3L4Q96K17 158 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 WFIKKN1Q96NZ8 548 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 C12orf57Q99622 126 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 TCEAL7Q9BRU2 100 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 COL25A1Q9BXS0 654 aaPredicted RBP5.44□□□□□ -1.54
USP28-206ENST00000538224 SAV1Q9H4B6 383 aaPredicted RBP5.44□□□□□ -1.54
USP28-206ENST00000538224 SLC25A22Q9H936 323 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 OR51B2Q9Y5P1 312 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 ARL2-SNX15V9GYD0 113 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 DOCK11Q5JSL3 2073 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 CELSR3Q9NYQ7 3312 aa5.44□□□□□ -1.54
USP28-206ENST00000538224 DSPP15924 2871 aaKnown RBP5.44□□□□□ -1.54
USP28-206ENST00000538224 YLPM1P49750 1951 aaKnown RBP5.44□□□□□ -1.54
USP28-206ENST00000538224 CADP27708 2225 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 ZFHX4Q86UP3 3567 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.43□□□□□ -1.54
USP28-206ENST00000538224 hCG_1809904A0A1W2PP81 198 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 A0A1W2PPE2 198 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 A0A1W2PR64 198 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 A0A1W2PRV1 198 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 E7EQL1 145 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 CLDN34H7C241 214 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 J3QR06 171 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 DVL1O14640 695 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 TNFRSF13BO14836 293 aaPredicted RBP5.43□□□□□ -1.54
USP28-206ENST00000538224 VENTXO95231 258 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 CXorf1O96002 111 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 OPN1MWP04001 364 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 S100A8P05109 93 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 IL6RP08887 468 aaPredicted RBP5.43□□□□□ -1.54
USP28-206ENST00000538224 CT45A6P0DMU7 189 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 CT45A5P0DMU8 189 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 CT45A7P0DMV0 189 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 OPN1MW2P0DN77 364 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 OPN1MW3P0DN78 364 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 MC5RP33032 325 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 AKR1C3P42330 323 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 RPL29P47914 159 aaKnown RBP5.43□□□□□ -1.54
USP28-206ENST00000538224 SUB1P53999 127 aaKnown RBP eCLIP5.43□□□□□ -1.54
USP28-206ENST00000538224 LINC00205P59089 165 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 RHOBP62745 196 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 NHLH1Q02575 133 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 SSX2Q16385 188 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 TMEM241Q24JQ0 296 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 VMA21Q3ZAQ7 101 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 TMEM155Q4W5P6 130 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 C2orf83Q53S99 150 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 PRR30Q53SZ7 412 aaPredicted RBP5.43□□□□□ -1.54
USP28-206ENST00000538224 SPINK9Q5DT21 86 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 TMEM200BQ69YZ2 307 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 DUX4L9Q6RFH8 374 aaPredicted RBP5.43□□□□□ -1.54
USP28-206ENST00000538224 TREML4Q6UXN2 200 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 SSX7Q7RTT5 188 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 DMRTC2Q8IXT2 367 aaPredicted RBP5.43□□□□□ -1.54
USP28-206ENST00000538224 VKORC1L1Q8N0U8 176 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 FAM24BQ8N5W8 94 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 OR5AN1Q8NGI8 311 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 OR4C13Q8NGP0 309 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 OR1L8Q8NGR8 309 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 OR9G1Q8NH87 305 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 ZCCHC14Q8WYQ9 949 aaKnown RBP5.43□□□□□ -1.54
USP28-206ENST00000538224 CCL17Q92583 94 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 FLYWCH2Q96CP2 140 aaKnown RBP5.43□□□□□ -1.54
USP28-206ENST00000538224 SLC35E1Q96K37 410 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 HARBI1Q96MB7 349 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 SMIM7Q9BQ49 75 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 TMEM204Q9BSN7 226 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 C19orf24Q9BVV8 132 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 GGTLC1Q9BX51 225 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 COMMD5Q9GZQ3 224 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 CHODLQ9H9P2 273 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 SDF2L1Q9HCN8 221 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 WASHC3Q9Y3C0 194 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 CBY1Q9Y3M2 126 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 AMMECR1Q9Y4X0 333 aaPredicted RBP5.43□□□□□ -1.54
USP28-206ENST00000538224 PXMP4Q9Y6I8 212 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 ACACAQ13085 2346 aa5.43□□□□□ -1.54
USP28-206ENST00000538224 CFAP47Q6ZTR5 3102 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 A0A1W2PPE3 182 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 H0YJW9 148 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 RRHO14718 337 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 IGKV1D-33P01593 117 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 IGKV1-33P01594 117 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 IGHV3-7P01780 117 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 STAG3L2P0CL84 134 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 STAG3L3P0CL85 134 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 SAA1P0DJI8 122 aaPredicted RBP5.42□□□□□ -1.54
USP28-206ENST00000538224 S100PP25815 95 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 LOXP28300 417 aaPredicted RBP5.42□□□□□ -1.54
USP28-206ENST00000538224 MEOX2P50222 304 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 RND2P52198 227 aa5.42□□□□□ -1.54
USP28-206ENST00000538224 CD81P60033 236 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms