RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 OR10J4P0C629 311 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 SPCS3P61009 180 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 B2MP61769 119 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 GNB1P62873 340 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 STUMQ69YW2 141 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 HEPN1Q6WQI6 88 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 SPACA3Q8IXA5 215 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 OR4P4Q8NGL7 312 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 GAFA1Q96PS6 74 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 GPR61Q9BZJ8 451 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 TRBV23-1A0A0A0MS06 115 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 PLAUP00749 431 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 FABP4P15090 132 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 IGFBP2P18065 325 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 TNFRSF1AP19438 455 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 COX7A1P24310 79 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 ADIPOQQ15848 244 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 ASPHD1Q5U4P2 390 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 HARBI1Q96MB7 349 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 PCGF1Q9BSM1 259 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 PLEKHA3Q9HB20 300 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 OR7C2O60412 319 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 YPEL1O60688 119 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 CLN5O75503 358 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 FOXH1O75593 365 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 CEACAM4O75871 244 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 RPP30P78346 268 aaKnown RBP7.16□□□□□ -1.26
UBE3B-208ENST00000538070 RELBQ01201 579 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 ATP6V1FQ16864 119 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 FAM78BQ5VT40 261 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 TRAT1Q6PIZ9 186 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 SLC24A4Q8NFF2 622 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 YPEL2Q96QA6 119 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 MRPL20Q9BYC9 149 aaKnown RBP7.16□□□□□ -1.26
UBE3B-208ENST00000538070 COA4Q9NYJ1 87 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 IDI2-AS1Q9NZ38 188 aa7.16□□□□□ -1.26
UBE3B-208ENST00000538070 CSMD1Q96PZ7 3565 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 hADV38S2A0JD32 116 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 SRRM4A7MD48 611 aaKnown RBP7.15□□□□□ -1.26
UBE3B-208ENST00000538070 AGAP20933 346 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 TIMP3P35625 211 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 GALR1P47211 349 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 KRTCAP3Q53RY4 240 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 TREML4Q6UXN2 200 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 MBD3L1Q8WWY6 194 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 EGLN1Q9GZT9 426 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 SDF2L1Q9HCN8 221 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 IL19Q9UHD0 177 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 PPIAL4EA0A075B759 164 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 C5orf52A6NGY3 159 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 PPIAL4DF5H284 164 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 MBP02144 154 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 TRGC1P0CF51 173 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 PPIAL4FP0DN26 164 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 GRNP28799 593 aaKnown RBP7.15□□□□□ -1.26
UBE3B-208ENST00000538070 RAB7AP51149 207 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 RTL8BQ17RB0 113 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 DPPA3Q6W0C5 159 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 NEIL1Q96FI4 390 aaPredicted RBP7.15□□□□□ -1.26
UBE3B-208ENST00000538070 COMMD5Q9GZQ3 224 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 RPH3ALQ9UNE2 315 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 PPIAL4AQ9Y536 164 aa7.15□□□□□ -1.26
UBE3B-208ENST00000538070 C17orf100A8MU93 164 aa7.15□□□□□ -1.27
UBE3B-208ENST00000538070 NDUFB3O43676 98 aa7.15□□□□□ -1.27
UBE3B-208ENST00000538070 NDUFA2O43678 99 aa7.15□□□□□ -1.27
UBE3B-208ENST00000538070 GFRA3O60609 400 aa7.15□□□□□ -1.27
UBE3B-208ENST00000538070 C19orf35Q6ZS72 473 aa7.15□□□□□ -1.27
UBE3B-208ENST00000538070 SEPSECSQ9HD40 501 aaKnown RBP7.15□□□□□ -1.27
UBE3B-208ENST00000538070 NAT8Q9UHE5 227 aa7.15□□□□□ -1.27
UBE3B-208ENST00000538070 PIEZO1Q92508 2521 aa7.15□□□□□ -1.27
UBE3B-208ENST00000538070 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.14□□□□□ -1.27
UBE3B-208ENST00000538070 PMS2P5A8MQ11 134 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 PPP1R2P9O14990 202 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HRASP01112 189 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 RPL23P62829 140 aaKnown RBP7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HCP5Q6MZN7 132 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 OR10A7Q8NGE5 316 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 MGST2Q99735 147 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 TET2Q6N021 2002 aaPredicted RBP7.14□□□□□ -1.27
UBE3B-208ENST00000538070 VSTM5A8MXK1 200 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 PPIHO43447 177 aaKnown RBP7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST1H2BKO60814 126 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST1H2BJP06899 126 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 C1QTNF9P0C862 333 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST1H2BOP23527 126 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST1H2BBP33778 126 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST1H2BDP58876 126 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HSPE1P61604 102 aaKnown RBP7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST1H2BCP62807 126 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 RAB31Q13636 194 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST2H2BEQ16778 126 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.14□□□□□ -1.27
UBE3B-208ENST00000538070 IGFL3Q6UXB1 125 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 STPG3Q8N7X2 389 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 ZCCHC14Q8WYQ9 949 aaKnown RBP7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST1H2BHQ93079 126 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST1H2BNQ99877 126 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 HIST1H2BMQ99879 126 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 SMDT1Q9H4I9 107 aa7.14□□□□□ -1.27
UBE3B-208ENST00000538070 MIOXQ9UGB7 285 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms