RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NBEAQ8NFP9 2946 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 TRBV20OR9-2A0A075B6H5 130 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 A0A0U1RQK1 487 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 KBTBD11-OT1A0A1B0GTJ5 212 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 ZNF320A2RRD8 509 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 ITGB1BP1O14713 200 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 GZMBP10144 247 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 RPRMLQ8N4K4 120 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 LINC00469Q8N7U9 141 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 SFRP2Q96HF1 295 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 BDP1A6H8Y1 2624 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 TET2Q6N021 2002 aaPredicted RBP11.78□□□□□ -0.52
USP44-203ENST00000537435 TSTD3H0UI37 97 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 HSPE1P61604 102 aaKnown RBP11.78□□□□□ -0.52
USP44-203ENST00000537435 LYG1Q8N1E2 194 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 C14orf144Q96I85 54 aa11.78□□□□□ -0.52
USP44-203ENST00000537435 SEPSECSQ9HD40 501 aaKnown RBP11.78□□□□□ -0.52
USP44-203ENST00000537435 FOXA2Q9Y261 457 aaPredicted RBP11.78□□□□□ -0.52
USP44-203ENST00000537435 MDFIC2A0A1B0GVS7 189 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 MYOD1P15172 320 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 THBS3P49746 956 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 MRPS11P82912 194 aaKnown RBP11.77□□□□□ -0.53
USP44-203ENST00000537435 SPATA31B1PQ5VZV4 182 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 TEPPQ6URK8 271 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 TMEM144Q7Z5S9 345 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 ZADH2Q8N4Q0 377 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 STPG3Q8N7X2 389 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.77□□□□□ -0.53
USP44-203ENST00000537435 ENY2Q9NPA8 101 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 TMEM14BQ9NUH8 114 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 YTHDF2Q9Y5A9 579 aaKnown RBP11.77□□□□□ -0.53
USP44-203ENST00000537435 IGLV3-9A0A075B6K5 115 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 CA2P00918 260 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 COL8A2P25067 703 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 DDTP30046 118 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 GCHFRP30047 84 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 GNG10P50151 68 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 CNN1P51911 297 aaKnown RBP11.77□□□□□ -0.53
USP44-203ENST00000537435 RPL15P61313 204 aaKnown RBP11.77□□□□□ -0.53
USP44-203ENST00000537435 EFNB3Q15768 340 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 FAM222BQ8WU58 562 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 IMMP2LQ96T52 175 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 NCOR1P1Q9H4R4 102 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 RAB9BQ9NP90 201 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 IDI2-AS1Q9NZ38 188 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 ASPMQ8IZT6 3477 aa11.77□□□□□ -0.53
USP44-203ENST00000537435 TRGV10A0A0A0MS01 117 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 HNF1AP20823 631 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 FOXL1Q12952 345 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 TCF23Q7RTU1 214 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 DEFB108BQ8NET1 73 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 SGMS2Q8NHU3 365 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 HINT2Q9BX68 163 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 PARD6AQ9NPB6 346 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 RNF7Q9UBF6 113 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 TRAPPC1Q9Y5R8 145 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 CFAP47Q6ZTR5 3102 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 CEACAM4O75871 244 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 GATA4P43694 442 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 RHOBP62745 196 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 UNQ6494/PRO21346Q6UXR6 183 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 GCM1Q9NP62 436 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 FAM215AQ9Y5M1 114 aa11.76□□□□□ -0.53
USP44-203ENST00000537435 A0A087X0M5 115 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 A0A1B0GX30 115 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 FOXH1O75593 365 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 IGFBP2P18065 325 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 BTF3L4Q96K17 158 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 ELOVL5Q9NYP7 299 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 RPL29P47914 159 aaKnown RBP11.75□□□□□ -0.53
USP44-203ENST00000537435 TNFAIP6P98066 277 aaPredicted RBP11.75□□□□□ -0.53
USP44-203ENST00000537435 RAB31Q13636 194 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 STUMQ69YW2 141 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 TMEM18Q96B42 140 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 ADTRPQ96IZ2 230 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 GAFA1Q96PS6 74 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 OR51B2Q9Y5P1 312 aa11.75□□□□□ -0.53
USP44-203ENST00000537435 IGHV1-46P01743 117 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 RPL31P62899 125 aaKnown RBP11.74□□□□□ -0.53
USP44-203ENST00000537435 REC114Q7Z4M0 266 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 OR4P4Q8NGL7 312 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 ZCCHC14Q8WYQ9 949 aaKnown RBP11.74□□□□□ -0.53
USP44-203ENST00000537435 CCL13Q99616 98 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 DSCAMO60469 2012 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 ZNF705GA8MUZ8 300 aaPredicted RBP11.74□□□□□ -0.53
USP44-203ENST00000537435 MMP23AO75900 390 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 GCGP01275 180 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 TIMP3P35625 211 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 POU2AF1Q16633 256 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 C3orf36Q3SXR2 165 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 TEX38Q6PEX7 206 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 FAM216BQ8N7L0 139 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 NEUROG1Q92886 237 aa11.74□□□□□ -0.53
USP44-203ENST00000537435 J3QR06 171 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 MT-CO2P00403 227 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 PRR20EP86478 221 aa11.73□□□□□ -0.53
USP44-203ENST00000537435 PRR20CP86479 221 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms