RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CTRB1P17538 263 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 OR2B8PP59922 312 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 DEFA5Q01523 94 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 FAM209BQ5JX69 171 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 CTRB2Q6GPI1 263 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 LHFPL1Q86WI0 220 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 OR52I2Q8NH67 350 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 FANCD2OSQ96PS1 177 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 SRSF8Q9BRL6 282 aaKnown RBP13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 HRASLSQ9HDD0 168 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 TMEM140Q9NV12 185 aa13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 CCDC59Q9P031 241 aaKnown RBP13.17□□□□□ -0.3
SFSWAP-205ENST00000537164 TRAV3A0A0B4J244 114 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 CTDSP2O14595 271 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 PSMB6P28072 239 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 ATP5G2Q06055 141 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 LAX1Q8IWV1 398 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 SLC38A6Q8IZM9 456 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 ARRDC1Q8N5I2 433 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 DMBX1Q8NFW5 382 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 FCAMRQ8WWV6 532 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 FYTTD1Q96QD9 318 aaKnown RBP13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 PRR25Q96S07 402 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 ELOVL1Q9BW60 279 aa13.16□□□□□ -0.3
SFSWAP-205ENST00000537164 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 GABARAPH6UMI1 98 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 DHFRP00374 187 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 IGLV1-51P01701 117 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 CD74P04233 296 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 MYOD1P15172 320 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 AREGP15514 252 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 PTBP1P26599 531 aaKnown RBP eCLIP13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 S100GP29377 79 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 LPAR6P43657 344 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 MRPS10P82664 201 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 SSBP1Q04837 148 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 EXOSC2Q13868 293 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 C15orf32Q32M92 178 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 THOC7Q6I9Y2 204 aaKnown RBP13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 IL34Q6ZMJ4 242 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 OR6Q1Q8NGQ2 317 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 OR4C12Q96R67 309 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 COMMD5Q9GZQ3 224 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 SIGLEC8Q9NYZ4 499 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 DMRT1Q9Y5R6 373 aa13.15□□□□□ -0.3
SFSWAP-205ENST00000537164 IGLC7A0M8Q6 106 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 DPPA5A6NC42 116 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 M0QYG6 137 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 BMPR1BO00238 502 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 RGS5O15539 181 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 OR2J3O76001 311 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 CD3DP04234 171 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 HIST1H1BP16401 226 aaKnown RBP13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 ERVK-16P61578 105 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 RNASE10Q5GAN6 216 aaKnown RBP13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 TMEM229BQ8NBD8 167 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 OR9G4Q8NGQ1 327 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 ZNF486Q96H40 463 aaPredicted RBP13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 RABL2AQ9UBK7 228 aaPredicted RBP13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 RABL2BQ9UNT1 228 aa13.14□□□□□ -0.31
SFSWAP-205ENST00000537164 IGLV11-55A0A075B6I3 123 aa13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 H3BMQ9 156 aa13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 SYNJ2BPP57105 145 aa13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 RND3P61587 244 aa13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 TATDN3Q17R31 274 aa13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 RPEL1Q2QD12 228 aa13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 PHLDA2Q53GA4 152 aa13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 C19orf35Q6ZS72 473 aa13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 HSD17B13Q7Z5P4 300 aaPredicted RBP13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 TBC1D26Q86UD7 250 aa13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 QTRT1Q9BXR0 403 aaKnown RBP13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 FBXL7Q9UJT9 491 aa13.13□□□□□ -0.31
SFSWAP-205ENST00000537164 TENM3Q9P273 2699 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 TEX50A0A1B0GTY4 177 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 CTDSPLO15194 276 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 KRASP01116 189 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 IFNA6P05013 189 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 SPNP16150 400 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 CD69Q07108 199 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 SMIM4Q8WVI0 70 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 ISOC1Q96CN7 298 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 SEC22AQ96IW7 307 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 SLIRPQ9GZT3 109 aaKnown RBP13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 NDUFA4L2Q9NRX3 87 aa13.12□□□□□ -0.31
SFSWAP-205ENST00000537164 NDUFB8O95169 186 aa13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 GP9P14770 177 aa13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 G6PCP35575 357 aa13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 TAS2R19P59542 299 aa13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 OR4D10Q8NGI6 311 aa13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 OR1L8Q8NGR8 309 aa13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 TERB2Q8NHR7 220 aa13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 CCDC140Q96MF4 163 aa13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 TSC22D3Q99576 134 aa13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 NXF2Q9GZY0 626 aaKnown RBP13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 TMEM14BQ9NUH8 114 aa13.11□□□□□ -0.31
SFSWAP-205ENST00000537164 STAB2Q8WWQ8 2551 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 IGKV1-39P01597 117 aa13.1□□□□□ -0.31
SFSWAP-205ENST00000537164 IGKV1D-39P04432 117 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms