RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 AKR1C4P17516 323 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 VDAC1P21796 283 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 PPIFP30405 207 aaKnown RBP9.46□□□□□ -0.9
CHD4-203ENST00000535717 G6PCP35575 357 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 ERVK-16P61578 105 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 SLC35B1P78383 322 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 ASAH1Q13510 395 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 TNXAQ16473 311 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 ECSCRQ19T08 205 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 C10orf55Q5SWW7 151 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 OR4A5Q8NH83 315 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 SGMS2Q8NHU3 365 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 SEC22AQ96IW7 307 aa9.46□□□□□ -0.9
CHD4-203ENST00000535717 CITED2Q99967 270 aaPredicted RBP9.46□□□□□ -0.9
CHD4-203ENST00000535717 TRRAPQ9Y4A5 3859 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 MSGN1A6NI15 193 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 LYRM1O43325 122 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 B3GALNT1O75752 331 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 ACTL6BO94805 426 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 NDUFB6O95139 128 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 IGHG4P01861 327 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 MYOD1P15172 320 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 UCP1P25874 307 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 MAS1LP35410 378 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 RPL8P62917 257 aaKnown RBP9.45□□□□□ -0.9
CHD4-203ENST00000535717 SUPT4H1P63272 117 aaKnown RBP9.45□□□□□ -0.9
CHD4-203ENST00000535717 CD83Q01151 205 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 RBMS2Q15434 407 aaKnown RBP9.45□□□□□ -0.9
CHD4-203ENST00000535717 AKIRIN2Q53H80 203 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 TMED4Q7Z7H5 227 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 SGPP2Q8IWX5 399 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 LFNGQ8NES3 379 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 OR4X2Q8NGF9 303 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 GLYATL2Q8WU03 294 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 SRSF12Q8WXF0 261 aaKnown RBP9.45□□□□□ -0.9
CHD4-203ENST00000535717 TMEM222Q9H0R3 208 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 TBC1D24Q9ULP9 559 aa9.45□□□□□ -0.9
CHD4-203ENST00000535717 SOX15O60248 233 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 IGKV1-5P01602 117 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 IGLV1-40P01703 118 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 C1QBP02746 253 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 OR9G9P0C7N8 305 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 HLA-GP17693 338 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 RAB25P57735 213 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 TMEM267Q0VDI3 215 aaPredicted RBP9.44□□□□□ -0.9
CHD4-203ENST00000535717 FOXE3Q13461 319 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 ASPHD1Q5U4P2 390 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 FAM122CQ6P4D5 195 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 TEX38Q6PEX7 206 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 UNQ5815/PRO19632Q6UWF5 114 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 LCNL1Q6ZST4 164 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 COMMD1Q8N668 190 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 LHFPL5Q8TAF8 219 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 GALNT14Q96FL9 552 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 FLVCR2Q9UPI3 526 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 FOXA2Q9Y261 457 aaPredicted RBP9.44□□□□□ -0.9
CHD4-203ENST00000535717 TMA7Q9Y2S6 64 aaKnown RBP9.44□□□□□ -0.9
CHD4-203ENST00000535717 KCNIP3Q9Y2W7 256 aa9.44□□□□□ -0.9
CHD4-203ENST00000535717 A0A1B0GW64 132 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 A0A1W2PN81 502 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 TCRBV4S1A1TA0A5B7 111 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 ADARB2-AS1A8MUL3 147 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 E7EUB6 86 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 CDS2O95674 445 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 OPN1MWP04001 364 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 FGF2P09038 288 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 P0C879 139 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 APELAP0DMC3 54 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 OPN1MW2P0DN77 364 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 OPN1MW3P0DN78 364 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 PSMB8P28062 276 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 CHRNA7P36544 502 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 RPL27AP46776 148 aaKnown RBP9.43□□□□□ -0.9
CHD4-203ENST00000535717 DHODHQ02127 395 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 TMEM187Q14656 261 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 TMEM128Q5BJH2 165 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 MZT2BQ6NZ67 158 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 H2BFWTQ7Z2G1 175 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 SLC25A42Q86VD7 318 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 RNF152Q8N8N0 203 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 PHB2Q99623 299 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 SPIN2AQ99865 258 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 SPIN2BQ9BPZ2 258 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 KLK15Q9H2R5 256 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 PRR13Q9NZ81 148 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 NSG2Q9Y328 171 aa9.43□□□□□ -0.9
CHD4-203ENST00000535717 TET2Q6N021 2002 aaPredicted RBP9.43□□□□□ -0.9
CHD4-203ENST00000535717 TEX50A0A1B0GTY4 177 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 A0A1W2PRX2 142 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 CGB1A6NKQ9 187 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 TEX22C9J3V5 150 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 SNAPC5O75971 98 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 RPLP1P05386 114 aaKnown RBP9.42□□□□□ -0.9
CHD4-203ENST00000535717 ELANEP08246 267 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 SLC6A1P30531 599 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 HTR2BP41595 481 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 OR2B8PP59922 312 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 IZUMO4Q1ZYL8 232 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 NSUN5P1Q3KNT7 163 aa9.42□□□□□ -0.9
CHD4-203ENST00000535717 NDUFA11Q86Y39 141 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms