RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 VENTXO95231 258 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 HABP2Q14520 560 aaPredicted RBP16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 TPSG1Q9NRR2 321 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 NUP50Q9UKX7 468 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 TCF19Q9Y242 345 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 TBL2Q9Y4P3 447 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 CCDC168Q8NDH2 2452 aa16.34■□□□□ 0.21
TNFRSF1A-205ENST00000534885 LGALS7P47929 136 aa16.33■□□□□ 0.21
TNFRSF1A-205ENST00000534885 SPCS3P61009 180 aa16.33■□□□□ 0.21
TNFRSF1A-205ENST00000534885 TMEM267Q0VDI3 215 aaPredicted RBP16.33■□□□□ 0.21
TNFRSF1A-205ENST00000534885 FBLN7Q53RD9 439 aa16.33■□□□□ 0.21
TNFRSF1A-205ENST00000534885 OR52E5Q8NH55 327 aa16.33■□□□□ 0.21
TNFRSF1A-205ENST00000534885 C7orf69Q9H7B7 122 aa16.33■□□□□ 0.21
TNFRSF1A-205ENST00000534885 TRAV40A0A0B4J280 105 aa16.33■□□□□ 0.2
TNFRSF1A-205ENST00000534885 NPFFO15130 113 aa16.33■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TAS2R30P59541 319 aa16.33■□□□□ 0.2
TNFRSF1A-205ENST00000534885 PDLIM3Q53GG5 364 aaPredicted RBP16.33■□□□□ 0.2
TNFRSF1A-205ENST00000534885 SPANXN5Q5MJ07 72 aa16.33■□□□□ 0.2
TNFRSF1A-205ENST00000534885 PRSS57Q6UWY2 283 aa16.33■□□□□ 0.2
TNFRSF1A-205ENST00000534885 LINC01356Q8N9X3 169 aa16.33■□□□□ 0.2
TNFRSF1A-205ENST00000534885 SLC25A31Q9H0C2 315 aa16.33■□□□□ 0.2
TNFRSF1A-205ENST00000534885 PRNDQ9UKY0 176 aa16.33■□□□□ 0.2
TNFRSF1A-205ENST00000534885 OR51B2Q9Y5P1 312 aa16.33■□□□□ 0.2
TNFRSF1A-205ENST00000534885 CREBBPQ92793 2442 aa16.32■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TRAV20A0A0B4J274 112 aa16.32■□□□□ 0.2
TNFRSF1A-205ENST00000534885 OPN1MWP04001 364 aa16.32■□□□□ 0.2
TNFRSF1A-205ENST00000534885 OPN1MW2P0DN77 364 aa16.32■□□□□ 0.2
TNFRSF1A-205ENST00000534885 OPN1MW3P0DN78 364 aa16.32■□□□□ 0.2
TNFRSF1A-205ENST00000534885 CD1BP29016 333 aa16.32■□□□□ 0.2
TNFRSF1A-205ENST00000534885 RUSC1-AS1Q66K80 236 aa16.32■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TMEM217Q8N7C4 229 aa16.32■□□□□ 0.2
TNFRSF1A-205ENST00000534885 ST8SIA2Q92186 375 aa16.32■□□□□ 0.2
TNFRSF1A-205ENST00000534885 LOC105371267A0A1B0GV96 52 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 IGKV1D-33P01593 117 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 IGKV1-33P01594 117 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 METTL15P1P0C7V9 234 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 HSPE1P61604 102 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 VMA21Q3ZAQ7 101 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 RPL7L1Q6DKI1 246 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 CCDC144NLQ6NUI1 221 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 VSTM2AQ8TAG5 236 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TMEM167AQ8TBQ9 72 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 WFDC1Q9HC57 220 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 ZNF469Q96JG9 3925 aaPredicted RBP16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 ZFHX3Q15911 3703 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 OOSP1A8MZH6 123 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 RPL8P62917 257 aaKnown RBP16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 PJVKQ0ZLH3 352 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 ALKAL2Q6UX46 152 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 MALSU1Q96EH3 234 aa16.31■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TAAR5O14804 337 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 AVPP01185 164 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 UBA52P62987 128 aaKnown RBP16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 HNF4GQ14541 408 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 PSG5Q15238 335 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 MRGPRG-AS1Q2M3A8 158 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 CIB3Q96Q77 187 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 OR4C12Q96R67 309 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 ZNF430Q9H8G1 570 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 IGHV1-69DA0A0B4J2H0 117 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TEX50A0A1B0GTY4 177 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 IGHV1-69P01742 117 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 IGHV4-38-2P0DP08 117 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 VDAC2P45880 294 aaPredicted RBP16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 CLINT1Q14677 625 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 BRD3OSQ6XYD6 125 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 OR5C1Q8NGR4 320 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 OR4A5Q8NH83 315 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 HINT2Q9BX68 163 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 ZNF257Q9Y2Q1 563 aa16.3■□□□□ 0.2
TNFRSF1A-205ENST00000534885 SNRNP70P08621 437 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 HOXA1P49639 335 aaPredicted RBP16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 SULT1A1P50225 295 aa16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 DYNLT3P51808 116 aa16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 BAXQ07812 192 aa16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 ARL16Q0P5N6 197 aa16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TMEM249Q2WGJ8 235 aa16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 HAPLN4Q86UW8 402 aa16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 STX12Q86Y82 276 aa16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 WFDC11Q8NEX6 87 aa16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TSNAXQ99598 290 aaKnown RBP16.29■□□□□ 0.2
TNFRSF1A-205ENST00000534885 ITPR3Q14573 2671 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TGFAP01135 160 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 CRYGBP07316 175 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 FGF2P09038 288 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 IGHV4-31P0DP07 118 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 GATA3P23771 443 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 F2RL1P55085 397 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 HES1Q14469 280 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 C10orf55Q5SWW7 151 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 TMEM14EPQ6UXP3 125 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 STOML3Q8TAV4 291 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 EAF1Q96JC9 268 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 HEYLQ9NQ87 328 aaPredicted RBP16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 FKBP11Q9NYL4 201 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 CACFD1Q9UGQ2 172 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 SIGLEC9Q9Y336 463 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 E7EUB6 86 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 MOSP00540 346 aa16.28■□□□□ 0.2
TNFRSF1A-205ENST00000534885 THNSL2Q86YJ6 484 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms