RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 XPNPEP1Q9NQW7 623 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 ZNHIT6Q9NWK9 470 aaKnown RBP-0.78□□□□□ -2.53
COPB1-212ENST00000534771 MAT2BQ9NZL9 334 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 EMC3Q9P0I2 261 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 IFNKQ9P0W0 207 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 U3KQ87 197 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 CHD5Q8TDI0 1954 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 ALMS1Q8TCU4 4167 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 POLQO75417 2590 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 FASNP49327 2511 aaKnown RBP-0.78□□□□□ -2.53
COPB1-212ENST00000534771 APC2O95996 2303 aa-0.78□□□□□ -2.53
COPB1-212ENST00000534771 ASCC3Q8N3C0 2202 aaKnown RBP-0.79□□□□□ -2.54
COPB1-212ENST00000534771 NPATQ14207 1427 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 CASP8AP2Q9UKL3 1982 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 PIK3R4Q99570 1358 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 CHD2O14647 1828 aaKnown RBP-0.79□□□□□ -2.54
COPB1-212ENST00000534771 TRBV30A0A0K0K1B3 111 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 TMEM269A0A1B0GVZ9 245 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 TRBV6-4A0A1B0GX49 114 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 EFCAB9A8MZ26 197 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 GOLGA8RI6L899 631 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 KLF7O75840 302 aaPredicted RBP-0.79□□□□□ -2.54
COPB1-212ENST00000534771 SULT1A3P0DMM9 295 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 SULT1A4P0DMN0 295 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 HIST1H1CP16403 213 aaKnown RBP-0.79□□□□□ -2.54
COPB1-212ENST00000534771 SPRR2DP22532 72 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 EIF2B2P49770 351 aaKnown RBP-0.79□□□□□ -2.54
COPB1-212ENST00000534771 RAB11BQ15907 218 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 C1orf137Q5JT78 98 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 SPANXN5Q5MJ07 72 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 FAM74A1Q5RGS3 127 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 FAHD1Q6P587 224 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 TTC33Q6PID6 262 aaPredicted RBP-0.79□□□□□ -2.54
COPB1-212ENST00000534771 PID1Q7Z2X4 250 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 ATP5L2Q7Z4Y8 100 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 DYNC2LI1Q8TCX1 351 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 GPX8Q8TED1 209 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 SFT2D1Q8WV19 159 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 C4orf3Q8WVX3 66 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 LRRC45Q96CN5 670 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 GAL3ST2Q9H3Q3 398 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 MED29Q9NX70 200 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 PSME2Q9UL46 239 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 BCORL1Q5H9F3 1711 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 CHD8Q9HCK8 2581 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 CELSR2Q9HCU4 2923 aa-0.79□□□□□ -2.54
COPB1-212ENST00000534771 RP1P56715 2156 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 A0A1B0GW54 56 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 TLCD2A6NGC4 264 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 SMIM9A6NGZ8 99 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 K7ERQ8 282 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 WRBO00258 174 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 COPEO14579 308 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 GPR171O14626 319 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 LEPROTO15243 131 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 ACOX3O15254 700 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 HBZP02008 142 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 HLA-DQB2P05538 268 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 OR8G3PP0DMU2 310 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 IFITM1P13164 125 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 SSR2P43308 183 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 ZNF80P51504 273 aaPredicted RBP-0.8□□□□□ -2.54
COPB1-212ENST00000534771 TMEM33P57088 247 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 SNAP25P60880 206 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 SUPT4H1P63272 117 aaKnown RBP-0.8□□□□□ -2.54
COPB1-212ENST00000534771 C1DQ13901 141 aaKnown RBP-0.8□□□□□ -2.54
COPB1-212ENST00000534771 OR4D1Q15615 310 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 LCN15Q6UWW0 184 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 ASCL4Q6XD76 172 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 RASSF6Q6ZTQ3 369 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 GPHB5Q86YW7 130 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 KATNAL2Q8IYT4 538 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 OR5B17Q8NGF7 314 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 GLYATL2Q8WU03 294 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 C11orf40Q8WZ69 217 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 PSMF1Q92530 271 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 OPTNQ96CV9 577 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 MRAP2Q96G30 205 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 OR7D2Q96RA2 312 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 OR8D2Q9GZM6 311 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 SYT4Q9H2B2 425 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 METTL8Q9H825 291 aaKnown RBP-0.8□□□□□ -2.54
COPB1-212ENST00000534771 TMBIM4Q9HC24 238 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 TNFSF18Q9UNG2 199 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 KPTNQ9Y664 436 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 PKHD1P08F94 4074 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 MYO18BQ8IUG5 2567 aa-0.8□□□□□ -2.54
COPB1-212ENST00000534771 TNRC18O15417 2968 aaPredicted RBP-0.81□□□□□ -2.54
COPB1-212ENST00000534771 IGLV3-32A0A0A0MS00 114 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 TRAV8-1A0A0A6YYK1 113 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 LOC107984156A0A0G2JMH3 177 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 GOLGA8IPA6NC78 632 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 CDIPTO14735 213 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 FABP7O15540 132 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 NSA2O95478 260 aaKnown RBP-0.81□□□□□ -2.54
COPB1-212ENST00000534771 KRT75O95678 551 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 IGHV3-7P01780 117 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 CTSDP07339 412 aaPredicted RBP-0.81□□□□□ -2.54
COPB1-212ENST00000534771 SFTPCP11686 197 aa-0.81□□□□□ -2.54
COPB1-212ENST00000534771 MIFP14174 115 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms