RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 CD28P10747 220 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 RPL27AP46776 148 aaKnown RBP12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 DEFA1P59665 94 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 DEFA3P59666 94 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 CD83Q01151 205 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 SRSF4Q08170 494 aaKnown RBP12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 ECSCRQ19T08 205 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 UNQ5815/PRO19632Q6UWF5 114 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 C10orf99Q6UWK7 81 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 ZNF695Q8IW36 515 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 FAM219AQ8IW50 185 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 LHFPL5Q8TAF8 219 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 SPIN2AQ99865 258 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 SPIN2BQ9BPZ2 258 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 FKBP11Q9NYL4 201 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 PRNDQ9UKY0 176 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 TNCP24821 2201 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 IGLV1-40P01703 118 aa12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 AKR1C2P52895 323 aa12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 FOXE3Q13461 319 aa12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 PPP1R1AQ13522 171 aa12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 TCTEX1D4Q5JR98 221 aa12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 LGI3Q8N145 548 aa12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 RNF152Q8N8N0 203 aa12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 OR5M8Q8NGP6 311 aa12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 RRNAD1Q96FB5 475 aaKnown RBP12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 COMMD5Q9GZQ3 224 aa12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 C20orf85Q9H1P6 137 aa12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 FOXA2Q9Y261 457 aaPredicted RBP12.89□□□□□ -0.35
PACSIN3-210ENST00000533686 DNHD1Q96M86 4753 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 OPN1MWP04001 364 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 OPN1MW2P0DN77 364 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 OPN1MW3P0DN78 364 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 VAMP1P23763 118 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 PSMB8P28062 276 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 OR2B8PP59922 312 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 C10orf55Q5SWW7 151 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 ASPHD1Q5U4P2 390 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 TMEM268Q5VZI3 342 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 THOC7Q6I9Y2 204 aaKnown RBP12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 C11orf44Q8N8P7 122 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 LRTM2Q8N967 370 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 DUSP18Q8NEJ0 188 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 OR4A16Q8NH70 328 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 LSM10Q969L4 123 aaKnown RBP12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 PHB2Q99623 299 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 SRSF8Q9BRL6 282 aaKnown RBP12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 TMEM14BQ9NUH8 114 aa12.88□□□□□ -0.35
PACSIN3-210ENST00000533686 A0A0B4J2A0 478 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 TEX50A0A1B0GTY4 177 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 A0A1W2PN81 502 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 DUXBA0A1W2PPF3 345 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 C9orf170A2RU37 121 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 C15orf61A6NNL5 157 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 TEX22C9J3V5 150 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 E7EUB6 86 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 BRI3O95415 125 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 OR4E1P0C645 316 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 ANXA7P20073 488 aaKnown RBP12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 CHRNA7P36544 502 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 MECP2P51608 486 aaKnown RBP12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 CXorf66Q5JRM2 361 aaPredicted RBP12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 NDUFA11Q86Y39 141 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 OR1L8Q8NGR8 309 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 OR5B3Q8NH48 314 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 RNASE11Q8TAA1 199 aaKnown RBP12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 ENKURQ8TC29 256 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 CITED2Q99967 270 aaPredicted RBP12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 ZFP57Q9NU63 452 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 NUDT15Q9NV35 164 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 SHPKQ9UHJ6 478 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 ZNF257Q9Y2Q1 563 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 NSG2Q9Y328 171 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 OR51B2Q9Y5P1 312 aa12.87□□□□□ -0.35
PACSIN3-210ENST00000533686 A0A0B4J293 547 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 A0A1B0GW64 132 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 TCRBV4S1A1TA0A5B7 111 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 CGB1A6NKQ9 187 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 H3BUA1 57 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 SOX15O60248 233 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 H2AFB2P0C5Z0 115 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 MYOD1P15172 320 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 ANKRD55Q3KP44 614 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 LYG2Q86SG7 212 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 ZNF429Q86V71 674 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 TTC9CQ8N5M4 171 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 SLC35G3Q8N808 338 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 FAM110DQ8TAY7 271 aaPredicted RBP12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 FYTTD1Q96QD9 318 aaKnown RBP12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 QTRT1Q9BXR0 403 aaKnown RBP12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 PALMDQ9NP74 551 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 NDUFA4L2Q9NRX3 87 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 PRR13Q9NZ81 148 aa12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 TSSC4Q9Y5U2 329 aaPredicted RBP12.86□□□□□ -0.35
PACSIN3-210ENST00000533686 TRAV6A0A075B6T7 132 aa12.85□□□□□ -0.35
PACSIN3-210ENST00000533686 A0A0G2JRQ6 117 aa12.85□□□□□ -0.35
PACSIN3-210ENST00000533686 HLA-AP01891 365 aaKnown RBP12.85□□□□□ -0.35
PACSIN3-210ENST00000533686 TRAPPC2P0DI81 140 aa12.85□□□□□ -0.35
PACSIN3-210ENST00000533686 TRAPPC2BP0DI82 140 aa12.85□□□□□ -0.35
PACSIN3-210ENST00000533686 RAB25P57735 213 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms