RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 SLC2A8Q9NY64 477 aa12.74□□□□□ -0.37
RDX-214ENST00000533678 ZMAT5Q9UDW3 170 aaKnown RBP12.74□□□□□ -0.37
RDX-214ENST00000533678 KCNIP3Q9Y2W7 256 aa12.74□□□□□ -0.37
RDX-214ENST00000533678 A0A0G2JLM5 398 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 MPPED1O15442 326 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 ATG12O94817 140 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 CTSDP07339 412 aaPredicted RBP12.73□□□□□ -0.37
RDX-214ENST00000533678 MAS1LP35410 378 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 BRWD1-AS2P59051 145 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 ZNF616Q08AN1 781 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 TNXAQ16473 311 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 TRIM16LQ309B1 348 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 DEFB136Q30KP8 78 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 SSX9Q7RTT3 188 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 TMED4Q7Z7H5 227 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 SGPP2Q8IWX5 399 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 PUSL1Q8N0Z8 303 aaKnown RBP12.73□□□□□ -0.37
RDX-214ENST00000533678 OR4A5Q8NH83 315 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 RNASE11Q8TAA1 199 aaKnown RBP12.73□□□□□ -0.37
RDX-214ENST00000533678 DUX3Q96PT4 197 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 SPIN2AQ99865 258 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 SPIN2BQ9BPZ2 258 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 SLC25A21Q9BQT8 299 aaPredicted RBP12.73□□□□□ -0.37
RDX-214ENST00000533678 ZNF430Q9H8G1 570 aaPredicted RBP12.73□□□□□ -0.37
RDX-214ENST00000533678 DNAH3Q8TD57 4116 aa12.73□□□□□ -0.37
RDX-214ENST00000533678 TNCP24821 2201 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 C3orf85A0A1B0GTC6 90 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 MSGN1A6NI15 193 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 KBTBD11O94819 623 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 TRGV3P03979 118 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 LGALS1P09382 135 aaKnown RBP12.72□□□□□ -0.37
RDX-214ENST00000533678 NQO2P16083 231 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 AKR1C4P17516 323 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 LPAR6P43657 344 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 RAB25P57735 213 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 TPPP2P59282 170 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 TAS2R31P59538 309 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 MZT2BQ6NZ67 158 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 OR5T1Q8NG75 326 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 TMEM167AQ8TBQ9 72 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 SRSF12Q8WXF0 261 aaKnown RBP12.72□□□□□ -0.37
RDX-214ENST00000533678 RHOVQ96L33 236 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 PLEKHA2Q9HB19 425 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 ZNF355PQ9NSJ1 428 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 BET1LQ9NYM9 111 aa12.72□□□□□ -0.37
RDX-214ENST00000533678 NOTCH3Q9UM47 2321 aa12.71□□□□□ -0.37
RDX-214ENST00000533678 RAMP3O60896 148 aa12.71□□□□□ -0.37
RDX-214ENST00000533678 B3GALNT1O75752 331 aa12.71□□□□□ -0.37
RDX-214ENST00000533678 ANXA3P12429 323 aa12.71□□□□□ -0.37
RDX-214ENST00000533678 RND3P61587 244 aa12.71□□□□□ -0.37
RDX-214ENST00000533678 RBMS2Q15434 407 aaKnown RBP12.71□□□□□ -0.37
RDX-214ENST00000533678 POU2AF1Q16633 256 aa12.71□□□□□ -0.37
RDX-214ENST00000533678 ASPHD1Q5U4P2 390 aa12.71□□□□□ -0.37
RDX-214ENST00000533678 SLC25A42Q86VD7 318 aa12.71□□□□□ -0.37
RDX-214ENST00000533678 MS4A10Q96PG2 267 aa12.71□□□□□ -0.37
RDX-214ENST00000533678 SDHCQ99643 169 aaPredicted RBP12.71□□□□□ -0.37
RDX-214ENST00000533678 GPR132Q9UNW8 380 aa12.71□□□□□ -0.37
RDX-214ENST00000533678 C13orf42A0A1B0GVH6 325 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 LYRM1O43325 122 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 SNAPC5O75971 98 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 KRASP01116 189 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 HSPB1P04792 205 aaKnown RBP12.7□□□□□ -0.38
RDX-214ENST00000533678 FGF2P09038 288 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 OR9G9P0C7N8 305 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 RPA2P15927 270 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 EGFEM1PQ0D2K5 195 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 VKORC1L1Q8N0U8 176 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 CASTOR1Q8WTX7 329 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 USMG5Q96IX5 58 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 OR5B12Q96R08 314 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 FAM212BQ9NTI7 297 aaPredicted RBP12.7□□□□□ -0.38
RDX-214ENST00000533678 COMMD9Q9P000 198 aa12.7□□□□□ -0.38
RDX-214ENST00000533678 LINC01619G3V211 115 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 H0Y980 276 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 RBMXL2O75526 392 aaKnown RBP12.69□□□□□ -0.38
RDX-214ENST00000533678 S1PR2O95136 353 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 CCR6P51684 374 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 DEFA1P59665 94 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 DEFA3P59666 94 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 C9orf66Q5T8R8 295 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 H2BFWTQ7Z2G1 175 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 CADM3Q8N126 398 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 CENPSQ8N2Z9 138 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 TTC9CQ8N5M4 171 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 COA4Q9NYJ1 87 aa12.69□□□□□ -0.38
RDX-214ENST00000533678 PIGBOS1A0A0B4J2F0 54 aa12.68□□□□□ -0.38
RDX-214ENST00000533678 MARCH11A6NNE9 402 aa12.68□□□□□ -0.38
RDX-214ENST00000533678 UPK1BO75841 260 aa12.68□□□□□ -0.38
RDX-214ENST00000533678 VAMP1P23763 118 aa12.68□□□□□ -0.38
RDX-214ENST00000533678 G6PCP35575 357 aa12.68□□□□□ -0.38
RDX-214ENST00000533678 RPL27AP46776 148 aaKnown RBP12.68□□□□□ -0.38
RDX-214ENST00000533678 INSL3P51460 131 aa12.68□□□□□ -0.38
RDX-214ENST00000533678 AKR1C2P52895 323 aa12.68□□□□□ -0.38
RDX-214ENST00000533678 RPL8P62917 257 aaKnown RBP12.68□□□□□ -0.38
RDX-214ENST00000533678 DHODHQ02127 395 aa12.68□□□□□ -0.38
RDX-214ENST00000533678 SP6Q3SY56 376 aa12.68□□□□□ -0.38
RDX-214ENST00000533678 OR4A47Q6IF82 309 aa12.68□□□□□ -0.38
RDX-214ENST00000533678 ADAD2Q8NCV1 583 aaKnown RBP12.68□□□□□ -0.38
RDX-214ENST00000533678 RRNAD1Q96FB5 475 aaKnown RBP12.68□□□□□ -0.38
RDX-214ENST00000533678 TSC22D3Q99576 134 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms