RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 MAP1LC3AQ9H492 121 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 CBLN4Q9NTU7 201 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 HIST1H1AQ02539 215 aaPredicted RBP12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 C1QTNF5Q9BXJ0 243 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 M0QZK8 103 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 CLDND2Q8NHS1 167 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 CBY3A6NI87 242 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 A6NJY4 79 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 COX6CP09669 75 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 SAMD13Q5VXD3 122 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 TCF24Q7RTU0 167 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 NABP2Q9BQ15 211 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 LINC00312Q9Y6C7 94 aa12.5□□□□□ -0.41
PCDHA9-202ENST00000532602 TCF20Q9UGU0 1960 aaKnown RBP12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 KBTBD11-OT1A0A1B0GTJ5 212 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 C12orf77C9JDV5 145 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 LYNX1G3V0Z9 82 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 LYNX1P0DP58 116 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 IFITM3Q01628 133 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 FBLIM1Q8WUP2 373 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 GPR82Q96P67 336 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 COL25A1Q9BXS0 654 aaPredicted RBP12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 H3BTX0 84 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 AQP10Q96PS8 301 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 PPP1R27Q86WC6 154 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 LHFPL5Q8TAF8 219 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 LINC00271P0C7V0 271 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 CBLN2Q8IUK8 224 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 KIR2DL4Q99706 377 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 FBXL7Q9UJT9 491 aa12.49□□□□□ -0.41
PCDHA9-202ENST00000532602 IQCF6A8MYZ5 107 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 IGKV1D-33P01593 117 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 IGKV1-33P01594 117 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 PSG7Q13046 419 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 SMUG1Q53HV7 270 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 LBHQ53QV2 105 aaPredicted RBP12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 PRO1933Q9H354 126 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 FBXL15Q9H469 300 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 IGHV3-66A0A0C4DH42 116 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 LINC00862A6NCI5 91 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 H7C1H1 209 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 MOSP00540 346 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 REPIN1Q9BWE0 567 aaKnown RBP12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 CD74P04233 296 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 FOXF2Q12947 444 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 SRSF12Q8WXF0 261 aaKnown RBP12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 C5orf66Q9H5L9 145 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 PEMTQ9UBM1 199 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 ZNF56Q15929 161 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 ABLIM2Q6H8Q1 611 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 RAB37Q96AX2 223 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 C21orf62Q9NYP8 219 aa12.48□□□□□ -0.41
PCDHA9-202ENST00000532602 NUDT3O95989 172 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 CIRBPQ14011 172 aaKnown RBP12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 TMEM187Q14656 261 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 ADIPOQQ15848 244 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 NCMAPQ5T1S8 102 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 LAIR2Q6ISS4 152 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 CEACAM4O75871 244 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 SIGIRRQ6IA17 410 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 ARPC1AQ92747 370 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 TMEM70Q9BUB7 260 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 IFT22Q9H7X7 185 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 OR4C46A6NHA9 309 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 ARL14EPLP0DKL9 152 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 CD81P60033 236 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 OR4A47Q6IF82 309 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 TICRRQ7Z2Z1 1910 aa12.47□□□□□ -0.41
PCDHA9-202ENST00000532602 UQCRFS1P47985 274 aa12.46□□□□□ -0.41
PCDHA9-202ENST00000532602 GGACTQ9BVM4 153 aa12.46□□□□□ -0.41
PCDHA9-202ENST00000532602 IGHV3OR16-13A0A075B7E8 117 aa12.46□□□□□ -0.41
PCDHA9-202ENST00000532602 IGHV3-74A0A0B4J1X5 117 aa12.46□□□□□ -0.41
PCDHA9-202ENST00000532602 A0A1W2PRX2 142 aa12.46□□□□□ -0.41
PCDHA9-202ENST00000532602 PRSS8Q16651 343 aa12.46□□□□□ -0.41
PCDHA9-202ENST00000532602 TM2D1Q9BX74 207 aa12.46□□□□□ -0.41
PCDHA9-202ENST00000532602 PRSS22Q9GZN4 317 aa12.46□□□□□ -0.41
PCDHA9-202ENST00000532602 IFI27L2Q9H2X8 130 aa12.46□□□□□ -0.41
PCDHA9-202ENST00000532602 METRNQ9UJH8 293 aa12.46□□□□□ -0.41
PCDHA9-202ENST00000532602 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 CA2P00918 260 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 FAM209BQ5JX69 171 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 A0A087WV48 116 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 PROB1E7EW31 1015 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 MYOD1P15172 320 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 CXCL2P19875 107 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 NMUP48645 174 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 DSCR9P59020 149 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 Q0VFX4 171 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 FAM74A4Q5TZK3 123 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 CYP2G1PQ6ZSU1 146 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 SMIM12Q96EX1 92 aa12.46□□□□□ -0.42
PCDHA9-202ENST00000532602 DIRC3C9JPN6 131 aa12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 RPL24P83731 157 aaKnown RBP12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 GOLT1AQ6ZVE7 132 aa12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 CACNA1IQ9P0X4 2223 aa12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 GGCTO75223 188 aaKnown RBP12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 IGKV3-20P01619 116 aa12.45□□□□□ -0.42
PCDHA9-202ENST00000532602 LINC00114Q6XXX2 140 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms